RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 NR1I3Q14994 352 aa24.24■■□□□ 1.47
ATXN3-253ENST00000621269 DEFB133Q30KQ1 61 aa24.24■■□□□ 1.47
ATXN3-253ENST00000621269 E4F1Q66K89 784 aaPredicted RBP24.24■■□□□ 1.47
ATXN3-253ENST00000621269 BRAT1Q6PJG6 821 aa24.24■■□□□ 1.47
ATXN3-253ENST00000621269 TP53I13Q8NBR0 393 aaPredicted RBP24.24■■□□□ 1.47
ATXN3-253ENST00000621269 TRIM7Q9C029 511 aa24.24■■□□□ 1.47
ATXN3-253ENST00000621269 SP110Q9HB58 689 aa24.24■■□□□ 1.47
ATXN3-253ENST00000621269 MBNL1Q9NR56 388 aaKnown RBP24.24■■□□□ 1.47
ATXN3-253ENST00000621269 APOBEC3BQ9UH17 382 aaKnown RBP24.24■■□□□ 1.47
ATXN3-253ENST00000621269 ADAMTS20P59510 1910 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 ANKRD11Q6UB99 2663 aaPredicted RBP24.23■■□□□ 1.47
ATXN3-253ENST00000621269 TSPAN11A1L157 253 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 RIOK3O14730 519 aaKnown RBP24.23■■□□□ 1.47
ATXN3-253ENST00000621269 EIF4A3P38919 411 aaKnown RBP24.23■■□□□ 1.47
ATXN3-253ENST00000621269 CSNK1DP48730 415 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 LRRC14Q15048 493 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 IQCB1Q15051 598 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 FAXCQ5TGI0 409 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 SRLQ86TD4 932 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 PHACTR4Q8IZ21 702 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 PAF1Q8N7H5 531 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 IFI44Q8TCB0 444 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 CINPQ9BW66 212 aaPredicted RBP24.23■■□□□ 1.47
ATXN3-253ENST00000621269 SLC13A1Q9BZW2 595 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 ATP13A3Q9H7F0 1226 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 PCDH12Q9NPG4 1184 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 SALL4Q9UJQ4 1053 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 NBEAQ8NFP9 2946 aa24.23■■□□□ 1.47
ATXN3-253ENST00000621269 ITPR1Q14643 2758 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 LY6G6EA0A0G2JKS1 128 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 TPP1O14773 563 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 BUB1BO60566 1050 aaPredicted RBP24.22■■□□□ 1.47
ATXN3-253ENST00000621269 LRCH4O75427 683 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 SERPINA4P29622 427 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 HCAR3P49019 387 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 IRF4Q15306 451 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 PRRT3Q5FWE3 981 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 FIGNQ5HY92 759 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 AFMIDQ63HM1 303 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 MACC1Q6ZN28 852 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 CAMK1DQ8IU85 385 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 RBFAQ8N0V3 343 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 MAPK15Q8TD08 544 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 DEPDC7Q96QD5 511 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 ZWILCHQ9H900 591 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 COQ6Q9Y2Z9 468 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 U3KQA8 63 aa24.22■■□□□ 1.47
ATXN3-253ENST00000621269 FAM208BQ5VWN6 2430 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 CPED1A4D0V7 1026 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 TMEM110-MUSTN1A8MSY1 372 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 RRP8O43159 456 aaKnown RBP24.21■■□□□ 1.47
ATXN3-253ENST00000621269 C6P13671 934 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 ADKP55263 362 aaKnown RBP24.21■■□□□ 1.47
ATXN3-253ENST00000621269 PPARDQ03181 441 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 IL10RBQ08334 325 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 RFTN1Q14699 578 aaPredicted RBP24.21■■□□□ 1.47
ATXN3-253ENST00000621269 ACAP1Q15027 740 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 CDKN3Q16667 212 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 TDRD12Q587J7 1177 aaKnown RBP24.21■■□□□ 1.47
ATXN3-253ENST00000621269 CDCP2Q5VXM1 449 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 LRRC69Q6ZNQ3 347 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 CYP4V2Q6ZWL3 525 aaPredicted RBP24.21■■□□□ 1.47
ATXN3-253ENST00000621269 ARHGAP12Q8IWW6 846 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 TSEN2Q8NCE0 465 aaKnown RBP24.21■■□□□ 1.47
ATXN3-253ENST00000621269 GLMNQ92990 594 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 TBATAQ96M53 351 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 ISCUQ9H1K1 167 aa24.21■■□□□ 1.47
ATXN3-253ENST00000621269 TCEAL2Q9H3H9 227 aaPredicted RBP24.21■■□□□ 1.47
ATXN3-253ENST00000621269 CWC15Q9P013 229 aaKnown RBP24.21■■□□□ 1.47
ATXN3-253ENST00000621269 H3BRJ5 948 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 LZTS3O60299 673 aaPredicted RBP24.2■■□□□ 1.46
ATXN3-253ENST00000621269 BRINP1O60477 761 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 ANXA6P08133 673 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 PCK1P35558 622 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 ACTN2P35609 894 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 EIF2S3P41091 472 aaKnown RBP24.2■■□□□ 1.46
ATXN3-253ENST00000621269 ABCG1P45844 678 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 RGRP47804 291 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 RPIAP49247 311 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 LIG3P49916 1009 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 PEX5P50542 639 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 BCL2L1Q07817 233 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 NSUN2Q08J23 767 aaKnown RBP eCLIP24.2■■□□□ 1.46
ATXN3-253ENST00000621269 C1orf61Q13536 156 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 NR0B2Q15466 257 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 LZTR1Q8N653 840 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 NPWQ8N729 165 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 FUCA2Q9BTY2 467 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.2■■□□□ 1.46
ATXN3-253ENST00000621269 ATP8A1Q9Y2Q0 1164 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 BZW2Q9Y6E2 419 aaKnown RBP24.2■■□□□ 1.46
ATXN3-253ENST00000621269 LAMA5O15230 3695 aa24.2■■□□□ 1.46
ATXN3-253ENST00000621269 GOLGA4Q13439 2230 aaKnown RBP24.19■■□□□ 1.46
ATXN3-253ENST00000621269 TLX3O43711 291 aaPredicted RBP24.19■■□□□ 1.46
ATXN3-253ENST00000621269 GCATO75600 419 aa24.19■■□□□ 1.46
ATXN3-253ENST00000621269 HTR1BP28222 390 aa24.19■■□□□ 1.46
ATXN3-253ENST00000621269 ARL4AP40617 200 aa24.19■■□□□ 1.46
ATXN3-253ENST00000621269 BLKP51451 505 aa24.19■■□□□ 1.46
ATXN3-253ENST00000621269 RENBPP51606 427 aa24.19■■□□□ 1.46
ATXN3-253ENST00000621269 POLR2LP62875 67 aaKnown RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms