RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TRAFD1O14545 582 aaPredicted RBP7.22□□□□□ -1.25
COLCA1-205ENST00000620864 HALP42357 657 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 MAZP56270 477 aaKnown RBP7.22□□□□□ -1.25
COLCA1-205ENST00000620864 CUL2Q13617 745 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 SLC51AQ86UW1 340 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 ZNF614Q8N883 585 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 RTKNQ9BST9 563 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 PLK2Q9NYY3 685 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 ASTN2O75129 1339 aaPredicted RBP7.22□□□□□ -1.25
COLCA1-205ENST00000620864 FOXN3O00409 490 aaPredicted RBP7.22□□□□□ -1.25
COLCA1-205ENST00000620864 CASKO14936 926 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 TLL1O43897 1013 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 SNX3O60493 162 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 ITGA10O75578 1167 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 PROSCO94903 275 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 HLA-DRAP01903 254 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 RLN1P04808 185 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 SCNN1AP37088 669 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 IDH2P48735 452 aaKnown RBP7.22□□□□□ -1.25
COLCA1-205ENST00000620864 GOLGA7BQ2TAP0 167 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 PAGE2Q7Z2X7 111 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 NAT14Q8WUY8 206 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 ISCA1Q9BUE6 129 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 MCOLN1Q9GZU1 580 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 CYP3A43Q9HB55 503 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 MTMR10Q9NXD2 777 aa7.22□□□□□ -1.25
COLCA1-205ENST00000620864 F5H5T6 163 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 SLC30A4O14863 429 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 SEC22BO75396 215 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 VDRP11473 427 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 COL9A1P20849 921 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 SCNN1BP51168 640 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 CCR3P51677 355 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 HSD17B12Q53GQ0 312 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 PIK3R6Q5UE93 754 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 TDRD10Q5VZ19 366 aaKnown RBP7.21□□□□□ -1.25
COLCA1-205ENST00000620864 MILR1Q7Z6M3 343 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 SETD7Q8WTS6 366 aaKnown RBP7.21□□□□□ -1.25
COLCA1-205ENST00000620864 LPAR1Q92633 364 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 NELL1Q92832 810 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 COLEC11Q9BWP8 271 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 FAIM2Q9BWQ8 316 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 UNKQ9C0B0 810 aaKnown RBP7.21□□□□□ -1.25
COLCA1-205ENST00000620864 LRRC4CQ9HCJ2 640 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 POLLQ9UGP5 575 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 PSMD13Q9UNM6 376 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 DCCP43146 1447 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 CKMP06732 381 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 CLCN2P51788 898 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 ANXA8L1Q5VT79 327 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 TRIM40Q6P9F5 258 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 DENND5BQ6ZUT9 1274 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 TTC7BQ86TV6 843 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 RNF149Q8NC42 400 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 MRPS31Q92665 395 aaKnown RBP7.21□□□□□ -1.25
COLCA1-205ENST00000620864 RIT2Q99578 217 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 CPVLQ9H3G5 476 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 MID1IP1Q9NPA3 183 aa7.21□□□□□ -1.25
COLCA1-205ENST00000620864 H7C4K7 107 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 PDCD5O14737 125 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 DHX15O43143 795 aaKnown RBP7.21□□□□□ -1.26
COLCA1-205ENST00000620864 ODC1P11926 461 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 GRB14Q14449 540 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 DEF8Q6ZN54 512 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 RAB11FIP2Q7L804 512 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 KCNMB4Q86W47 210 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 DQX1Q8TE96 717 aaKnown RBP7.21□□□□□ -1.26
COLCA1-205ENST00000620864 PYDC1Q8WXC3 89 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 ARNTL2Q8WYA1 636 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 RFKQ969G6 155 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 REXO5Q96IC2 774 aaKnown RBP7.21□□□□□ -1.26
COLCA1-205ENST00000620864 MGME1Q9BQP7 344 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 TBCDQ9BTW9 1192 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 SLC22A4Q9H015 551 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 OSGEPL1Q9H4B0 414 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 INTS10Q9NVR2 710 aaKnown RBP7.21□□□□□ -1.26
COLCA1-205ENST00000620864 CUEDC1Q9NWM3 386 aaPredicted RBP7.21□□□□□ -1.26
COLCA1-205ENST00000620864 SAE1Q9UBE0 346 aaPredicted RBP7.21□□□□□ -1.26
COLCA1-205ENST00000620864 TRPS1Q9UHF7 1281 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 VPS4AQ9UN37 437 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 A0A1B0GVC2 190 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 SLC28A1O00337 649 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 QSOX1O00391 747 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 EML1O00423 815 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 NAMPTP43490 491 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 BCAT1P54687 386 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 DDX39BQ13838 428 aaKnown RBP7.21□□□□□ -1.26
COLCA1-205ENST00000620864 CYP2A13Q16696 494 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 C4orf46Q504U0 113 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 C10orf120Q5SQS8 335 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 LYPLAL1Q5VWZ2 237 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 SLC25A25Q6KCM7 469 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 OR8H3Q8N146 312 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 ADAM32Q8TC27 787 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 METTL6Q8TCB7 284 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 FAM86C2PA6NEL3 165 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 PSIP1O75475 530 aaKnown RBP7.21□□□□□ -1.26
COLCA1-205ENST00000620864 NTSR2O95665 410 aa7.21□□□□□ -1.26
COLCA1-205ENST00000620864 MYBL2P10244 700 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms