RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 TBCDQ9BTW9 1192 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 TRIM45Q9H8W5 580 aaPredicted RBP13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 DDX4Q9NQI0 724 aaKnown RBP13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 COMMD8Q9NX08 183 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 IMPAD1Q9NX62 359 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 TBC1D30Q9Y2I9 924 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 EFCAB9A8MZ26 197 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 AIREO43918 545 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 ALDH3B2P48448 385 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 NOMO3P69849 1222 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 TXNL4AP83876 142 aaKnown RBP13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 GCNT1Q02742 428 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 SQLEQ14534 574 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 GRTP1Q5TC63 336 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 C1orf186Q6ZWK4 172 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 LARGE2Q8N3Y3 721 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 QKIQ96PU8 341 aaKnown RBP eCLIP13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 MKRN2Q9H000 416 aaKnown RBP13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 LHPPQ9H008 270 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 LRRC40Q9H9A6 602 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 DYRK4Q9NR20 520 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 PCDHGA7Q9Y5G6 932 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 CLTCQ00610 1675 aaKnown RBP13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 NRP1O14786 923 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 MSI1O43347 362 aaKnown RBP13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 FAM189A1O60320 539 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 GPD1P21695 349 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 GMPRP36959 345 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 CACNB3P54284 484 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 ATP6AP1LQ52LC2 224 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 ZNF57Q68EA5 555 aaPredicted RBP13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 SETD9Q8NE22 299 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 NAT9Q9BTE0 207 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 DCSTAMPQ9H295 470 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 UBP1Q9NZI7 540 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 UBA2Q9UBT2 640 aaPredicted RBP13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 PCDHA11Q9Y5I1 949 aa13.64□□□□□ -0.23
PPP4R3B-205ENST00000616288 A8MX80 341 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 PRR23D1E9PI22 279 aaPredicted RBP13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 TK2O00142 265 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 ABCB7O75027 752 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 BCAS1O75363 584 aaPredicted RBP13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 ZNF682O95780 498 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 C2P06681 752 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 PRR23D2P0DMB1 279 aaPredicted RBP13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 ITGALP20701 1170 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 MEP1AQ16819 746 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 BMT2Q1RMZ1 405 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 AGAP7PQ5VUJ5 663 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 PRMT9Q6P2P2 845 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 ZFPM1Q8IX07 1006 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 PIGBQ92521 554 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 TOP1MTQ969P6 601 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 RMDN3Q96TC7 470 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 CHCHD6Q9BRQ6 235 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 ACTR3BQ9P1U1 418 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 GABBR1Q9UBS5 961 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 ZNF222Q9UK12 451 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 TMEM191CA6NGB0 347 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 CST1P01037 141 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 MPOP05164 745 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 DDR2Q16832 855 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 UGP2Q16851 508 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 C5orf22Q49AR2 442 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 VPS26BQ4G0F5 336 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 MBLAC2Q68D91 279 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 ERMP1Q7Z2K6 904 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 LZTR1Q8N653 840 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 NETO2Q8NC67 525 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 KBTBD8Q8NFY9 601 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 KCNS3Q9BQ31 491 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 MROQ9BYG7 248 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 C14orf119Q9NWQ9 140 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 KCND2Q9NZV8 630 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 GON4LQ3T8J9 2241 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 ATRNO75882 1429 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 ZNF701M0R085 212 aaPredicted RBP13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 CYP24A1Q07973 514 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 TPRG1LQ5T0D9 272 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 LIPMQ5VYY2 423 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 PGM2L1Q6PCE3 622 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 LRP10Q7Z4F1 713 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 CHURC1Q8WUH1 139 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 SLC7A3Q8WY07 619 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 CCDC17Q96LX7 622 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 SLC4A9Q96Q91 983 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 CPNE1Q99829 537 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 ANKRD60Q9BZ19 345 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 KAT8Q9H7Z6 458 aaKnown RBP13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 THG1LQ9NWX6 298 aaKnown RBP13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 MRPS7Q9Y2R9 242 aaKnown RBP13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 PLD2O14939 933 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 MATN1P21941 496 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 SOX10P56693 466 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 CDAN1Q8IWY9 1227 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 AKAP1Q92667 903 aaKnown RBP eCLIP13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 C20orf27Q9GZN8 174 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 SLC35C2Q9NQQ7 365 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 XPR1Q9UBH6 696 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 STOML2Q9UJZ1 356 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms