RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CD151P48509 253 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 MAPK10P53779 464 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 SCGB2A2Q13296 93 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 SPIN3Q5JUX0 258 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 ZNF677Q86XU0 584 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 CRAMP1Q96RY5 1269 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 ABCB6Q9NP58 842 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 A0A0A6YYK5 440 aaPredicted RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 FAM86C2PA6NEL3 165 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 KCNQ2O43526 872 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 LRPAP1P30533 357 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 GRK5P34947 590 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 MMP13P45452 471 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 MRPL49Q13405 166 aaKnown RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 PSMD5Q16401 504 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 PTPN20Q4JDL3 420 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 C1orf186Q6ZWK4 172 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 PHF10Q8WUB8 498 aaKnown RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 AP2M1Q96CW1 435 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 HIPK3Q9H422 1215 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 MAGEA4P43358 317 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 PSMD7P51665 324 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 MRPS22P82650 360 aaKnown RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 VPS72Q15906 364 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 FRRS1Q6ZNA5 592 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 TMPPEQ6ZT21 453 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 MAB21L3Q8N8X9 362 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 RORBQ92753 470 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 PARD6BQ9BYG5 372 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 GLIS2Q9BZE0 524 aaPredicted RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 CCDC86Q9H6F5 360 aaKnown RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 PRMT8Q9NR22 394 aaPredicted RBP12.72□□□□□ -0.37
TCF4-248ENST00000616053 VPS4AQ9UN37 437 aa12.72□□□□□ -0.37
TCF4-248ENST00000616053 CITO14578 2027 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 MAPK11Q15759 364 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 TBCELQ5QJ74 424 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 BEND5Q7L4P6 421 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 ARMC10Q8N2F6 343 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 TAAR1Q96RJ0 339 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 HEPHQ9BQS7 1158 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 FDXACB1Q9BRP7 624 aaPredicted RBP12.71□□□□□ -0.37
TCF4-248ENST00000616053 POLR1EQ9GZS1 481 aaKnown RBP12.71□□□□□ -0.37
TCF4-248ENST00000616053 ABHD10Q9NUJ1 306 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 C2orf71A6NGG8 1288 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 PPP1R3GB7ZBB8 358 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 BDNFP23560 247 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 WASHC2DQ5SRD0 308 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 DEF8Q6ZN54 512 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 DEFB132Q7Z7B7 95 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 ZER1Q7Z7L7 766 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 ADAMTS15Q8TE58 950 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 DNAJC28Q9NX36 388 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 TMEM216Q9P0N5 145 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 LOC100506127A0A0U1RQW1 187 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 H0YJX3 145 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 PPP1R37O75864 691 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 CYP21A2P08686 494 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 ADORA2AP29274 412 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 BNC2Q6ZN30 1099 aaPredicted RBP12.71□□□□□ -0.37
TCF4-248ENST00000616053 KAT5Q92993 513 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 ARMC5Q96C12 935 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 NOD2Q9HC29 1040 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 PDCD5O14737 125 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 UBDO15205 165 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 GRM6O15303 877 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 OR10H3O60404 316 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 PGAM2P15259 253 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 CASP1P29466 404 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 SULT2A1Q06520 285 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 HMGB4Q8WW32 186 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 AIFM3Q96NN9 605 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 NUAK2Q9H093 628 aa12.71□□□□□ -0.37
TCF4-248ENST00000616053 CCDC88CQ9P219 2028 aa12.71□□□□□ -0.38
TCF4-248ENST00000616053 BEX3Q00994 111 aa12.71□□□□□ -0.38
TCF4-248ENST00000616053 IL17REQ8NFR9 667 aa12.71□□□□□ -0.38
TCF4-248ENST00000616053 FUT8Q9BYC5 575 aa12.71□□□□□ -0.38
TCF4-248ENST00000616053 TDP1Q9NUW8 608 aa12.71□□□□□ -0.38
TCF4-248ENST00000616053 NEMP2A6NFY4 417 aa12.71□□□□□ -0.38
TCF4-248ENST00000616053 A8MU76 341 aa12.71□□□□□ -0.38
TCF4-248ENST00000616053 SYNGR4O95473 234 aa12.71□□□□□ -0.38
TCF4-248ENST00000616053 CDC25BP30305 580 aa12.71□□□□□ -0.38
TCF4-248ENST00000616053 MANFP55145 182 aaKnown RBP12.71□□□□□ -0.38
TCF4-248ENST00000616053 ADNP2Q6IQ32 1131 aa12.71□□□□□ -0.38
TCF4-248ENST00000616053 ZNF433Q8N7K0 673 aaPredicted RBP12.71□□□□□ -0.38
TCF4-248ENST00000616053 RRN3Q9NYV6 651 aa12.71□□□□□ -0.38
TCF4-248ENST00000616053 VIL1P09327 827 aaKnown RBP12.7□□□□□ -0.38
TCF4-248ENST00000616053 CFL1P23528 166 aaKnown RBP12.7□□□□□ -0.38
TCF4-248ENST00000616053 ARSHQ5FYA8 562 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 WDR59Q6PJI9 974 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 ARID3BQ8IVW6 561 aaPredicted RBP12.7□□□□□ -0.38
TCF4-248ENST00000616053 ZSWIM3Q96MP5 696 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 ANKEF1Q9NU02 776 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 ERVW-1Q9UQF0 538 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 NDUFAF1Q9Y375 327 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 PTGES3LE9PB15 166 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 SLC26A2P50443 739 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 PYDC2Q56P42 97 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 CYP2R1Q6VVX0 501 aa12.7□□□□□ -0.38
TCF4-248ENST00000616053 PSTKQ8IV42 348 aaKnown RBP12.7□□□□□ -0.38
TCF4-248ENST00000616053 ABHD16BQ9H3Z7 469 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms