RNA–Protein interactions for RNA: ENST00000616000.4

STRA6-222, Transcript of stimulated by retinoic acid 6, human

APPRIS P1 TSL 2 BASIC

Gene STRA6, Length 2,843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRA6-222	ENST00000616000	GOLGA2P5	Q9HBQ8	144 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	PIGV	Q9NUD9	493 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	KLK14	Q9P0G3	267 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	AP2A1	O95782	977 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	ERCC2	P18074	760 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	NEK2	P51955	445 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	TUBA3C	Q13748	450 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	USP10	Q14694	798 aa	Known RBP	13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	MAPRE2	Q15555	327 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	LIPM	Q5VYY2	423 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	GK5	Q6ZS86	529 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	SLC41A1	Q8IVJ1	513 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	NPW	Q8N729	165 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	LRTOMT	Q8WZ04	291 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	TCF12	Q99081	682 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	ADA2	Q9NZK5	511 aa		13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	COPG1	Q9Y678	874 aa	Known RBP	13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	MRPL42	Q9Y6G3	142 aa	Known RBP	13.35	□□□□□ -0.27
STRA6-222	ENST00000616000	LOC285556	D6RIA3	1793 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	AQP9	O43315	295 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	OXSR1	O95747	527 aa	Predicted RBP	13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	NFKB1	P19838	968 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	SLC26A2	P50443	739 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	AARS2	Q5JTZ9	985 aa	Known RBP	13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	OGFOD2	Q6N063	350 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	ZYG11A	Q6WRX3	759 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	CYP2U1	Q7Z449	544 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	HERC6	Q8IVU3	1022 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	FSTL5	Q8N475	847 aa	Predicted RBP	13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	C1QTNF1	Q9BXJ1	281 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	TLK1	Q9UKI8	766 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	CDYL	Q9Y232	598 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	TCAF2	A6NFQ2	919 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	KCNU1	A8MYU2	1149 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	PFDN6	O15212	129 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	GRM5	P41594	1212 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	CDH15	P55291	814 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	PRKAA1	Q13131	559 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	OXA1L	Q15070	435 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	TRIM16L	Q309B1	348 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	FAM117B	Q6P1L5	589 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	LINC01465	Q8N7H1	131 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	SLC29A1	Q99808	456 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	TUT1	Q9H6E5	874 aa	Known RBP	13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	CASS4	Q9NQ75	786 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	SETD4	Q9NVD3	440 aa		13.34	□□□□□ -0.27
STRA6-222	ENST00000616000	DCLK1	O15075	740 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	DLX3	O60479	287 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	STAMBP	O95630	424 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	JUNB	P17275	347 aa	Predicted RBP	13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	CCNA2	P20248	432 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	NFATC3	Q12968	1075 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	STX5	Q13190	355 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	ATP1A4	Q13733	1029 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	RAB39A	Q14964	217 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	ZNF484	Q5JVG2	852 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	C9orf57	Q5W0N0	161 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	RPS27L	Q71UM5	84 aa	Known RBP	13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	DENND6A	Q8IWF6	608 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	ZNF786	Q8N393	782 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	USP33	Q8TEY7	942 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	ACD	Q96AP0	544 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	XPR1	Q9UBH6	696 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000		A0A1W2PPW3	197 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	HEATR9	A2RTY3	570 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	NEMP2	A6NFY4	417 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	TRIM24	O15164	1050 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	TIMM44	O43615	452 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	SLC35E2B	P0CK96	405 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	CYP2C8	P10632	490 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	PABPC1	P11940	636 aa	Known RBP	13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	CYP2B6	P20813	491 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	PSME3	P61289	254 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	RALGDS	Q12967	914 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	CTBP1	Q13363	440 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	PAFAH1B3	Q15102	231 aa	Known RBP	13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	DALRD3	Q5D0E6	543 aa	Known RBP	13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	MTX3	Q5HYI7	312 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	ZNF280D	Q6N043	979 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	UNC93A	Q86WB7	457 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	CENPL	Q8N0S6	344 aa	Predicted RBP	13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	NXNL1	Q96CM4	212 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	OTUD5	Q96G74	571 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	IL22	Q9GZX6	179 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	NXF3	Q9H4D5	531 aa	Known RBP	13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	SNX13	Q9Y5W8	968 aa		13.33	□□□□□ -0.28
STRA6-222	ENST00000616000	CPNE6	O95741	557 aa		13.32	□□□□□ -0.28
STRA6-222	ENST00000616000	HSPA8	P11142	646 aa	Known RBP	13.32	□□□□□ -0.28
STRA6-222	ENST00000616000	IGFBP6	P24592	240 aa	Predicted RBP	13.32	□□□□□ -0.28
STRA6-222	ENST00000616000	HOXA11	P31270	313 aa	Predicted RBP	13.32	□□□□□ -0.28
STRA6-222	ENST00000616000	HNRNPF	P52597	415 aa	Known RBP	13.32	□□□□□ -0.28
STRA6-222	ENST00000616000	MPP1	Q00013	466 aa		13.32	□□□□□ -0.28
STRA6-222	ENST00000616000	FRG1	Q14331	258 aa	Known RBP	13.32	□□□□□ -0.28
STRA6-222	ENST00000616000	KCTD2	Q14681	263 aa		13.32	□□□□□ -0.28
STRA6-222	ENST00000616000	ANO4	Q32M45	955 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms