RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 IL1BP01584 269 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 FUCA1P04066 466 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 ADH1AP07327 375 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 FAM58BPP0C7Q3 252 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 STT3AP46977 705 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 GSSP48637 474 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 HSPA13P48723 471 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 CDH6P55285 790 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 OGFRL1Q5TC84 451 aaPredicted RBP13.21□□□□□ -0.29
FOXN3-219ENST00000615335 LPCAT2Q7L5N7 544 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 CHSY1Q86X52 802 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 CENPSQ8N2Z9 138 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 CATSPER1Q8NEC5 780 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 SERAC1Q96JX3 654 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 KLHL5Q96PQ7 755 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 NGRNQ9NPE2 291 aaKnown RBP13.21□□□□□ -0.29
FOXN3-219ENST00000615335 ADAMTS6Q9UKP5 1117 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 H7C0C1 242 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 TNFRSF10BO14763 440 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 TIMM44O43615 452 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 SPAG6O75602 509 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 DHRS4L1P0CG22 281 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 ZNF23P17027 643 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 IRS1P35568 1242 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 ATP5OP48047 213 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 SLC18A2Q05940 514 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 CAMK1Q14012 370 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 TFDP2Q14188 446 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 KCNJ11Q14654 390 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 DENND5BQ6ZUT9 1274 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 SLC26A9Q7LBE3 791 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 PPP4R1Q8TF05 950 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 GIPC2Q8TF65 315 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 FAF2Q96CS3 445 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 PEBP4Q96S96 227 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 NUF2Q9BZD4 464 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.21□□□□□ -0.39e-7■■■□□ 15.7
FOXN3-219ENST00000615335 GNPTGQ9UJJ9 305 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 MAD1L1Q9Y6D9 718 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 TEX264Q9Y6I9 313 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 TRANK1O15050 2925 aa13.21□□□□□ -0.3
FOXN3-219ENST00000615335 CAPN14A8MX76 684 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 ZNF701M0R085 212 aaPredicted RBP13.2□□□□□ -0.3
FOXN3-219ENST00000615335 TGM5O43548 720 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 PDGFRAP16234 1089 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 ATF6P18850 670 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 GPD1P21695 349 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 ETV4P43268 484 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 ZNF143P52747 638 aaPredicted RBP13.2□□□□□ -0.3
FOXN3-219ENST00000615335 C21orf59P57076 290 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 DAOAP59103 153 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 YWHAZP63104 245 aaKnown RBP13.2□□□□□ -0.3
FOXN3-219ENST00000615335 NR1D2Q14995 579 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 GRAMD1BQ3KR37 738 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 SLC7A5P1Q8MH63 180 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 KHSRPQ92945 711 aaKnown RBP eCLIP13.2□□□□□ -0.35e-7■■■■□ 21.2
FOXN3-219ENST00000615335 TTC17Q96AE7 1141 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 PLEKHA8Q96JA3 519 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 FAM111AQ96PZ2 611 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 FBXO6Q9NRD1 293 aaPredicted RBP13.2□□□□□ -0.3
FOXN3-219ENST00000615335 USP3Q9Y6I4 520 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 PATJQ8NI35 1801 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 YJEFN3A6XGL0 299 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 CHADO15335 359 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 DNAJA2O60884 412 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 ENDOD1O94919 500 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 ALDH1A3P47895 512 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 PUS10Q3MIT2 529 aaKnown RBP13.2□□□□□ -0.3
FOXN3-219ENST00000615335 PM20D1Q6GTS8 502 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 TMEM126BQ8IUX1 230 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.2□□□□□ -0.3
FOXN3-219ENST00000615335 RXFP2Q8WXD0 754 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 SPATA17Q96L03 361 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 CCDC138Q96M89 665 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 PRPF18Q99633 342 aaKnown RBP13.2□□□□□ -0.3
FOXN3-219ENST00000615335 CTRCQ99895 268 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 CNPY3Q9BT09 278 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 FBXO44Q9H4M3 255 aa13.2□□□□□ -0.3
FOXN3-219ENST00000615335 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.2□□□□□ -0.32e-6■■□□□ 12.8
FOXN3-219ENST00000615335 C2CD4BA6NLJ0 364 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 K7EPI3 171 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 CCNT2O60583 730 aaKnown RBP13.19□□□□□ -0.3
FOXN3-219ENST00000615335 SRGAP2BP0DMP2 458 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 BGNP21810 368 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 SCNN1AP37088 669 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 MYBPC1Q00872 1141 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 BTKQ06187 659 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 PRKD1Q15139 912 aaPredicted RBP13.19□□□□□ -0.3
FOXN3-219ENST00000615335 SH3PXD2AQ5TCZ1 1133 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 BPHLQ86WA6 291 aaPredicted RBP13.19□□□□□ -0.3
FOXN3-219ENST00000615335 RAB3IL1Q8TBN0 382 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 PYDC1Q8WXC3 89 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 CFAP36Q96G28 342 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 GCNAQ96QF7 691 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 KCNK13Q9HB14 408 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 RAB6BQ9NRW1 208 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 VPS45Q9NRW7 570 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 PAK5Q9P286 719 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 MAGED2Q9UNF1 606 aaPredicted RBP13.19□□□□□ -0.3
FOXN3-219ENST00000615335 ZNF638Q14966 1978 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms