RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 A0A087X1B8 175 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 TYW5A2RUC4 315 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 OR51F1A6NGY5 319 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CBX4O00257 560 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 SYNCRIPO60506 623 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 IPO13O94829 963 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 AXLP30530 894 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 GLUD2P49448 558 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CCNG1P51959 295 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 MAP3K10Q02779 954 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 GTF2H3Q13889 308 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 GALNT3Q14435 633 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 SQLEQ14534 574 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 POLD3Q15054 466 aaPredicted RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ADRM1Q16186 407 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 DDR2Q16832 855 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 AASDHQ4L235 1098 aaPredicted RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ATP6AP1LQ52LC2 224 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 IL23RQ5VWK5 629 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ANKS6Q68DC2 871 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CCDC81Q6ZN84 652 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 TIFABQ6ZNK6 161 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 GPR142Q7Z601 462 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ADCY4Q8NFM4 1077 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 FAM162AQ96A26 154 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ESAMQ96AP7 390 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 TBCDQ9BTW9 1192 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 GPR63Q9BZJ6 419 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 C1orf21Q9H246 121 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 RIC8BQ9NVN3 520 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ZNF112Q9UJU3 913 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 COPG1Q9Y678 874 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CCDC189A1A4V9 331 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 PTGES3LE9PB15 166 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 SNNO75324 88 aaPredicted RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 PGK1P00558 417 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 PFKMP08237 780 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 SLC1A2P43004 574 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CDH15P55291 814 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 DCTN2Q13561 401 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ATP1A4Q13733 1029 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ADGRE1Q14246 886 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 PLCL1Q15111 1095 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 NADK2Q4G0N4 442 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 POTEHQ6S545 545 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 EPGNQ6UW88 154 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ZC3HC1Q86WB0 502 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CRYBG2Q8N1P7 616 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 DHRSXQ8N5I4 330 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 LZTR1Q8N653 840 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 TOP6BLQ8N6T0 577 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ATP6V0D2Q8N8Y2 350 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 LPCAT1Q8NF37 534 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 NLGN2Q8NFZ4 835 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 SHKBP1Q8TBC3 707 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 RDH11Q8TC12 318 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 MZB1Q8WU39 189 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 FIG4Q92562 907 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 EZH1Q92800 747 aaPredicted RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 B3GALT6Q96L58 329 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 TBATAQ96M53 351 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 PPP1R2P1Q96PQ5 205 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ACOX2Q99424 681 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CINPQ9BW66 212 aaPredicted RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CXCL16Q9H2A7 254 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 EIF2B3Q9NR50 452 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ZMYM5Q9UJ78 669 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 FBXW11Q9UKB1 542 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CITO14578 2027 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 IGKV6-21A0A0C4DH24 114 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 A0A0J9YYE9 177 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 DHRS12A0PJE2 317 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CAPN14A8MX76 684 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CCNT2O60583 730 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 LDLRP01130 860 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 SERPINF2P08697 491 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 PROZP22891 400 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 YWHAQP27348 245 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 USP46P62068 366 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 XIAPP98170 497 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 DSC2Q02487 901 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CHRNB3Q05901 458 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 MSLNQ13421 630 aaPredicted RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 RBM20Q5T481 1227 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ARHGAP36Q6ZRI8 547 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 DCP1BQ8IZD4 617 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ASIC4Q96FT7 647 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 NSMCE2Q96MF7 247 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 BTBD9Q96Q07 612 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 ADAM2Q99965 735 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 MRPS26Q9BYN8 205 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 POLR1BQ9H9Y6 1135 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 LIN28AQ9H9Z2 209 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 GALNT8Q9NY28 637 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CNTN3Q9P232 1028 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 CDH9Q9ULB4 789 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 DERAQ9Y315 318 aa6.91□□□□□ -1.3
SYNPO2-206ENST00000610556 C1orf232A0A0U1RR37 186 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms