RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 CHST12Q9NRB3 414 aa12.67□□□□□ -0.38
CTCFL-218ENST00000608440 CPSF3Q9UKF6 684 aaKnown RBP12.67□□□□□ -0.38
CTCFL-218ENST00000608440 FZD1Q9UP38 647 aa12.67□□□□□ -0.38
CTCFL-218ENST00000608440 CDY2AQ9Y6F7 541 aa12.67□□□□□ -0.38
CTCFL-218ENST00000608440 CDY1Q9Y6F8 540 aa12.67□□□□□ -0.38
CTCFL-218ENST00000608440 TCRBV3S1A0A5B6 114 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 WDR64B1ANS9 1081 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 USP17L15C9J2P7 530 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 USP17L13C9JLJ4 530 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 USP17L11C9JVI0 530 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 USP17L18D6R9N7 530 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 USP17L22D6RA61 530 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 USP17L17D6RBQ6 530 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 USP17L19D6RCP7 530 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 USP17L20D6RJB6 530 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 CST8O60676 142 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 HDCP19113 662 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 DSG3P32926 999 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 CCR10P46092 362 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 OR2B6P58173 313 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 USP17L24Q0WX57 530 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 NFIAQ12857 509 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 DGUOKQ16854 277 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 IMPG1Q17R60 797 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 COLEC12Q5KU26 742 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 BRMS1LQ5PSV4 323 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 C1orf220Q5T0J3 134 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 RSBN1LQ6PCB5 846 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-218ENST00000608440 NAPRTQ6XQN6 538 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 GADL1Q6ZQY3 521 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 BBS12Q6ZW61 710 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 CATSPER4Q7RTX7 472 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 TFAP2DQ7Z6R9 452 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 AFAP1L2Q8N4X5 818 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 DEPDC1BQ8WUY9 529 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 VTI1AQ96AJ9 217 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 KCTD14Q9BQ13 255 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-218ENST00000608440 SEPT10Q9P0V9 454 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 PNMA8BQ9ULN7 279 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-218ENST00000608440 CDK5RAP2Q96SN8 1893 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 HEATR9A2RTY3 570 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 FAM25AB3EWG3 89 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 FAM25CB3EWG5 89 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 FAM25GB3EWG6 89 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 TPP1O14773 563 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 EIF3DO15371 548 aaKnown RBP eCLIP12.66□□□□□ -0.38
CTCFL-218ENST00000608440 INMTO95050 263 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 SLC4A1P02730 911 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 TSHRP16473 764 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 JUNBP17275 347 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-218ENST00000608440 MMP8P22894 467 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 NUDT1P36639 197 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 SLC26A3P40879 764 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 HCAR3P49019 387 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 ADPRMQ3LIE5 342 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 TBC1D10BQ4KMP7 808 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-218ENST00000608440 CYBRD1Q53TN4 286 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 ODR4Q5SWX8 454 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 TREML2Q5T2D2 321 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 HHIPL2Q6UWX4 724 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 ZNF720Q7Z2F6 126 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 ANKRD13AQ8IZ07 590 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 UNC5BQ8IZJ1 945 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 IL17RDQ8NFM7 739 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 RHOXF1Q8NHV9 184 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 LRRC20Q8TCA0 184 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 FAF2Q96CS3 445 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 UHRF1Q96T88 793 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-218ENST00000608440 CBWD1Q9BRT8 395 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 PI4K2AQ9BTU6 479 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 REXO4Q9GZR2 422 aaKnown RBP12.66□□□□□ -0.38
CTCFL-218ENST00000608440 CCDC90BQ9GZT6 254 aa12.66□□□□□ -0.38
CTCFL-218ENST00000608440 DDX60LQ5H9U9 1706 aaKnown RBP12.65□□□□□ -0.38
CTCFL-218ENST00000608440 TCAF2A6NFQ2 919 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 SHOXO15266 292 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 IL7RP16871 459 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 MPSTP25325 297 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 IL12AP29459 219 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 HARS2P49590 506 aaKnown RBP12.65□□□□□ -0.38
CTCFL-218ENST00000608440 YWHAZP63104 245 aaKnown RBP12.65□□□□□ -0.38
CTCFL-218ENST00000608440 TFAMQ00059 246 aaKnown RBP12.65□□□□□ -0.38
CTCFL-218ENST00000608440 RHAGQ02094 409 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 SMARCB1Q12824 385 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 KCNT1Q5JUK3 1230 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 CLVS2Q5SYC1 327 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 R3HCC1LQ7Z5L2 792 aaKnown RBP12.65□□□□□ -0.38
CTCFL-218ENST00000608440 CAND1Q86VP6 1230 aaKnown RBP12.65□□□□□ -0.38
CTCFL-218ENST00000608440 ZDHHC15Q96MV8 337 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 PLAC1Q9HBJ0 212 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 FBXO8Q9NRD0 319 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 TEKT2Q9UIF3 430 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 CHRNGP07510 517 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 CDKN2BP42772 138 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 SERPINB10P48595 397 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 AP2S1P53680 142 aaPredicted RBP12.65□□□□□ -0.38
CTCFL-218ENST00000608440 TOR2AQ5JU69 321 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 C6orf132Q5T0Z8 1188 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 LIN9Q5TKA1 542 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 NXNL2Q5VZ03 156 aa12.65□□□□□ -0.38
CTCFL-218ENST00000608440 ERAP2Q6P179 960 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms