RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ZFP28Q8NHY6 868 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 CERS2Q96G23 380 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 SNTG2Q9NY99 539 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 IRGMA1A4Y4 181 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 NADKO95544 446 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 CYP1A2P05177 515 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 FOSL2P15408 326 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 FAUP35544 74 aaKnown RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 BACE1P56817 501 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 AUHQ13825 339 aaKnown RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 POLNQ7Z5Q5 900 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 LINC00116Q8NCU8 138 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 ELMO1Q92556 727 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 NTSR2O95665 410 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 CXCR2P25025 360 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 RBL1P28749 1068 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 SLC20A2Q08357 652 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 PALB2Q86YC2 1186 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 ZNF607Q96SK3 696 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 FDXACB1Q9BRP7 624 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 FAIM2Q9BWQ8 316 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 SLC12A4Q9UP95 1085 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 SIGLEC16A6NMB1 481 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 G3V2T6 193 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 SERPINB7O75635 380 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 GJB6O95452 261 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 DLG4P78352 724 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 MYBPC1Q00872 1141 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 PARP6Q2NL67 630 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 HKDC1Q2TB90 917 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 CRTC3Q6UUV7 619 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 PACS1Q6VY07 963 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 NKX2-3Q8TAU0 364 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 EFR3BQ9Y2G0 817 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 DHRS7Q9Y394 339 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 ABLIM1O14639 778 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 ACSL4O60488 711 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 SLC12A3P55017 1021 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 OLR1P78380 273 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 MED22Q15528 200 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 CDYL2Q8N8U2 506 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 THG1LQ9NWX6 298 aaKnown RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 SPG21Q9NZD8 308 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 PRPF19Q9UMS4 504 aaKnown RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 AREL1O15033 823 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 NR2F1P10589 423 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 POLR2EP19388 210 aaKnown RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 PTPN5P54829 565 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 RAB10P61026 200 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 BCL2L1Q07817 233 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 EFCAB3Q8N7B9 438 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 PTGR2Q8N8N7 351 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 ACE2Q9BYF1 805 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 CD163L1Q9NR16 1453 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 LACTBL1A8MY62 500 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 DDX3YO15523 660 aaKnown RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 OR10H2O60403 315 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 ACADLP28330 430 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 PRKAG1P54619 331 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 RALGDSQ12967 914 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 FNDC3BQ53EP0 1204 aaKnown RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 PCID2Q5JVF3 399 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 PTCHD4Q6ZW05 846 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 PIWIL4Q7Z3Z4 852 aaKnown RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 C12orf56Q8IXR9 622 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 ZNF655Q8N720 491 aaPredicted RBP9.66□□□□□ -0.86
CSMD1-217ENST00000602723 TKTL2Q9H0I9 626 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 ZDHHC6Q9H6R6 413 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 KANSL3Q9P2N6 904 aa9.66□□□□□ -0.86
CSMD1-217ENST00000602723 E5RJQ4 531 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 LIASO43766 372 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 WFS1O76024 890 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 LRATO95237 230 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 CCNYL3P0C7X3 344 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 CAMK1Q14012 370 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 MTX3Q5HYI7 312 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 AFTPHQ6ULP2 937 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 AGBL3Q8NEM8 1001 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 RCN3Q96D15 328 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 FBXO6Q9NRD1 293 aaPredicted RBP9.65□□□□□ -0.86
CSMD1-217ENST00000602723 OR10H1Q9Y4A9 318 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 PCDHGA3Q9Y5H0 932 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 LINC00032P0C843 101 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 HOXB6P17509 224 aaKnown RBP9.65□□□□□ -0.86
CSMD1-217ENST00000602723 CLCN5P51795 746 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 RPL38P63173 70 aaKnown RBP9.65□□□□□ -0.86
CSMD1-217ENST00000602723 METTL7BQ6UX53 244 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 DET1Q7L5Y6 550 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 ZBTB46Q86UZ6 589 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 RP9Q8TA86 221 aaKnown RBP9.65□□□□□ -0.86
CSMD1-217ENST00000602723 PFDN2Q9UHV9 154 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 GSAPA4D1B5 854 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 MCIDASD6RGH6 385 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 BCKDKO14874 412 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 FADS2O95864 444 aaKnown RBP9.65□□□□□ -0.86
CSMD1-217ENST00000602723 SDC2P34741 201 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 AP5B1Q2VPB7 878 aa9.65□□□□□ -0.86
CSMD1-217ENST00000602723 FAM171BQ6P995 826 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms