RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 ANKRD22Q5VYY1 191 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 NAPEPLDQ6IQ20 393 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 HIBCHQ6NVY1 386 aaPredicted RBP14.47□□□□□ -0.09
UPF1-211ENST00000600868 BRAT1Q6PJG6 821 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 TMPRSS6Q8IU80 811 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 MCUQ8NE86 351 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 UBXN4Q92575 508 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 IFT43Q96FT9 208 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 PPP1R16AQ96I34 528 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 TBL1YQ9BQ87 522 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 RHOXF2Q9BQY4 288 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 FICDQ9BVA6 458 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 ADGRE3Q9BY15 652 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 FAM129AQ9BZQ8 928 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 MKRN2Q9H000 416 aaKnown RBP14.47□□□□□ -0.09
UPF1-211ENST00000600868 DPH5Q9H2P9 285 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 ARNT2Q9HBZ2 717 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 EPB41L5Q9HCM4 733 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 FAM114A2Q9NRY5 505 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 GRHL1Q9NZI5 618 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 SCML1Q9UN30 329 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 SHOC2Q9UQ13 582 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 CHKBQ9Y259 395 aa14.47□□□□□ -0.09
UPF1-211ENST00000600868 TCRBV7S3A2A0A539 114 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 TCRBV21S2A2A0A5A6 115 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 KPNA3O00505 521 aaPredicted RBP14.46□□□□□ -0.09
UPF1-211ENST00000600868 TP73O15350 636 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 TMEM63AO94886 807 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 AGTP01019 485 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 PDHA1P08559 390 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 ATXN1LP0C7T5 689 aaKnown RBP14.46□□□□□ -0.09
UPF1-211ENST00000600868 SLC8A1P32418 973 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 PSMD8P48556 350 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 ITGA8P53708 1063 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 TERF1P54274 439 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 POLR2LP62875 67 aaKnown RBP14.46□□□□□ -0.09
UPF1-211ENST00000600868 SARNPP82979 210 aaKnown RBP14.46□□□□□ -0.09
UPF1-211ENST00000600868 CAV1Q03135 178 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 ZBTB16Q05516 673 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 MTAPQ13126 283 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 SPARCL1Q14515 664 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 SLC1A5Q15758 541 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 SYCP2LQ5T4T6 812 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 CFAP58Q5T655 872 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 BMP8AQ7Z5Y6 402 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 PIH1D2Q8WWB5 315 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 RUBCNQ92622 972 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 PRCCQ92733 491 aaPredicted RBP14.46□□□□□ -0.09
UPF1-211ENST00000600868 ERLEC1Q96DZ1 483 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 MRGPRX1Q96LB2 322 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 HINFPQ9BQA5 517 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 HDAC8Q9BY41 377 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 GDF3Q9NR23 364 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 POLR3BQ9NW08 1133 aaPredicted RBP14.46□□□□□ -0.09
UPF1-211ENST00000600868 C2orf42Q9NWW7 574 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 ANAPC5Q9UJX4 755 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 PHTF1Q9UMS5 762 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 PPIL1Q9Y3C6 166 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 PCDHB9Q9Y5E1 797 aa14.46□□□□□ -0.09
UPF1-211ENST00000600868 TTC28Q96AY4 2481 aa14.46□□□□□ -0.1
UPF1-211ENST00000600868 ANKRD66B4E2M5 251 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 AP3B1O00203 1094 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 MID1O15344 667 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 USP12O75317 370 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 ALDH1A2O94788 518 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 PAPSS2O95340 614 aaPredicted RBP14.45□□□□□ -0.1
UPF1-211ENST00000600868 FGF1P05230 155 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 MLNP12872 115 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 GABRG2P18507 467 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 NDUFV2P19404 249 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 SUOXP51687 545 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 SFSWAPQ12872 951 aaKnown RBP14.45□□□□□ -0.1
UPF1-211ENST00000600868 OLIG2Q13516 323 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 CUL1Q13616 776 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 TRADDQ15628 312 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 SIRPB2Q5JXA9 342 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 DENND5AQ6IQ26 1287 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 LRRC8BQ6P9F7 803 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 PPP1R21Q6ZMI0 780 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 KDELC2Q7Z4H8 507 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 ZSWIM9Q86XI8 627 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 IFT20Q8IY31 132 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 NDUFAF2Q8N183 169 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 CAMKK1Q8N5S9 505 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 TSTD1Q8NFU3 115 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 PDCD6IPQ8WUM4 868 aaKnown RBP14.45□□□□□ -0.1
UPF1-211ENST00000600868 ART4Q93070 314 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 PBXIP1Q96AQ6 731 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 ARRDC3Q96B67 414 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 SIPA1Q96FS4 1042 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 FRMD8Q9BZ67 464 aaPredicted RBP14.45□□□□□ -0.1
UPF1-211ENST00000600868 PABPC3Q9H361 631 aaKnown RBP14.45□□□□□ -0.1
UPF1-211ENST00000600868 ANKZF1Q9H8Y5 726 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 CASS4Q9NQ75 786 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 DYRK4Q9NR20 520 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 VCANP13611 3396 aa14.45□□□□□ -0.1
UPF1-211ENST00000600868 ESYT3A0FGR9 886 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 C16orf96A6NNT2 1141 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 TNFRSF10AO00220 468 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 CPP00450 1065 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms