RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 SHROOM1Q2M3G4 852 aaPredicted RBP14.61□□□□□ -0.07
SYMPK-215ENST00000600237 PPP1R15BQ5SWA1 713 aa14.61□□□□□ -0.07
SYMPK-215ENST00000600237 TNS4Q8IZW8 715 aa14.61□□□□□ -0.07
SYMPK-215ENST00000600237 LRRC57Q8N9N7 239 aa14.61□□□□□ -0.07
SYMPK-215ENST00000600237 DNAJB14Q8TBM8 379 aa14.61□□□□□ -0.07
SYMPK-215ENST00000600237 CCDC28BQ9BUN5 200 aa14.61□□□□□ -0.07
SYMPK-215ENST00000600237 DUSP16Q9BY84 665 aa14.61□□□□□ -0.07
SYMPK-215ENST00000600237 CORO2BQ9UQ03 480 aa14.61□□□□□ -0.07
SYMPK-215ENST00000600237 GSTK1Q9Y2Q3 226 aa14.61□□□□□ -0.07
SYMPK-215ENST00000600237 HES2Q9Y543 173 aa14.61□□□□□ -0.07
SYMPK-215ENST00000600237 SHOX2O60902 331 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 NUP62P37198 522 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 COX10Q12887 443 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 SGCGQ13326 291 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 DUSP28Q4G0W2 176 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 SETMARQ53H47 684 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 LCLAT1Q6UWP7 414 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 MTMR14Q8NCE2 650 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 MARK4Q96L34 752 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 OMDQ99983 421 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 TBC1D30Q9Y2I9 924 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 MYO5BQ9ULV0 1848 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 SLC28A1O00337 649 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 ZBTB48P10074 688 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 IDH2P48735 452 aaKnown RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 SNRPD1P62314 119 aaKnown RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 EVX2Q03828 476 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 QPCTQ16769 361 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 LYPLAL1Q5VWZ2 237 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 SPESP1Q6UW49 350 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 LBX2Q6XYB7 198 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 ALYREFQ86V81 257 aaKnown RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 ST13P5Q8NFI4 369 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 WDR60Q8WVS4 1066 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 FANCEQ9HB96 536 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 MRPL17Q9NRX2 175 aaKnown RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 SLC17A7Q9P2U7 560 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 ENTPD4Q9Y227 616 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 A0A088AWK7 358 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 BBIP1A8MTZ0 92 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 KPNA3O00505 521 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 LIN7AO14910 233 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 PGM3O95394 542 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 ZNF10P21506 573 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 HSPA14Q0VDF9 509 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 DGCR6Q14129 220 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 ZNF483Q8TF39 744 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 CD101Q93033 1021 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 NACC2Q96BF6 587 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 FAM124BQ9H5Z6 455 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 PSME2Q9UL46 239 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 VWA7Q9Y334 891 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 PRR5-ARHGAP8B1AHC4 643 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 VAV1P15498 845 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 LPOP22079 712 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 CXCR2P25025 360 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 SKP1P63208 163 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 ARHGAP8P85298 464 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 CDK18Q07002 472 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 ZNF618Q5T7W0 954 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 PPP1R26Q5T8A7 1209 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 METTL21CQ5VZV1 264 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 C12orf50Q8NA57 414 aaPredicted RBP14.6□□□□□ -0.07
SYMPK-215ENST00000600237 NLGN2Q8NFZ4 835 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 PPTC7Q8NI37 304 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 C7orf26Q96N11 449 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 TTYH3Q9C0H2 523 aa14.6□□□□□ -0.07
SYMPK-215ENST00000600237 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.6□□□□□ -0.074e-7■■■□□ 16.4
SYMPK-215ENST00000600237 ANKDD1BA6NHY2 528 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 BTBD19C9JJ37 291 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 PIAS1O75925 651 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 ITGA2P17301 1181 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 NOMO2Q5JPE7 1267 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 PQLC1Q8N2U9 271 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 NDNQ99608 321 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 MAF1Q9H063 256 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 POLR1BQ9H9Y6 1135 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 C8orf4Q9NR00 106 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 ITGB1BP2Q9UKP3 347 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 PSMD13Q9UNM6 376 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 AP4B1Q9Y6B7 739 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 AK5Q9Y6K8 562 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 USP2O75604 605 aaPredicted RBP14.59□□□□□ -0.07
SYMPK-215ENST00000600237 CCDC149Q6ZUS6 474 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 DEPDC4Q8N2C3 294 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 FAM13CQ8NE31 585 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 HELQQ8TDG4 1101 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 MYLPFQ96A32 169 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 SSU72Q9NP77 194 aaKnown RBP14.59□□□□□ -0.07
SYMPK-215ENST00000600237 R3HDM2Q9Y2K5 976 aaKnown RBP14.59□□□□□ -0.07
SYMPK-215ENST00000600237 NFAT5O94916 1531 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 GSC2O15499 205 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 AVILO75366 819 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 C2P06681 752 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 CDC25CP30307 473 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 STX4Q12846 297 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 CTBP1Q13363 440 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 RGS21Q2M5E4 152 aa14.59□□□□□ -0.07
SYMPK-215ENST00000600237 GJC2Q5T442 439 aaPredicted RBP14.59□□□□□ -0.07
SYMPK-215ENST00000600237 CDYL2Q8N8U2 506 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms