RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 DENND5AQ6IQ26 1287 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 TRMT11Q7Z4G4 463 aaKnown RBP15.58■□□□□ 0.08
UPF1-206ENST00000598471 GJD3Q8N144 294 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 NDUFAF2Q8N183 169 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 ZNF513Q8N8E2 541 aaPredicted RBP15.58■□□□□ 0.08
UPF1-206ENST00000598471 LPCAT1Q8NF37 534 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 OR2A12Q8NGT7 310 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 KCNV2Q8TDN2 545 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 PTCD2Q8WV60 388 aaKnown RBP15.58■□□□□ 0.08
UPF1-206ENST00000598471 OR8D1Q8WZ84 308 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 ZNF641Q96N77 438 aaPredicted RBP15.58■□□□□ 0.08
UPF1-206ENST00000598471 TRIB3Q96RU7 358 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 OSBPL1AQ9BXW6 950 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 SEMA4AQ9H3S1 761 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 VPS37BQ9H9H4 285 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 SYBUQ9NX95 663 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 IL36AQ9UHA7 158 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 DUSP12Q9UNI6 340 aa15.58■□□□□ 0.08
UPF1-206ENST00000598471 HEATR9A2RTY3 570 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 HTRA2O43464 458 aaPredicted RBP15.57■□□□□ 0.08
UPF1-206ENST00000598471 PGLSO95336 258 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 ACSL3O95573 720 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 ABHD2P08910 425 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 ATXN1LP0C7T5 689 aaKnown RBP15.57■□□□□ 0.08
UPF1-206ENST00000598471 NFKBIAP25963 317 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 GRIA4P48058 902 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 GALNT3Q14435 633 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 IHHQ14623 411 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 SLC44A4Q53GD3 710 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 TMEM196Q5HYL7 178 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 PCID2Q5JVF3 399 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 CERCAMQ5T4B2 595 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 EGFLAMQ63HQ2 1017 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 SDE2Q6IQ49 451 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 TXNDC11Q6PKC3 985 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 GDPD4Q6W3E5 623 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 DSG4Q86SJ6 1040 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 CAMK1DQ8IU85 385 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 SFTPA1Q8IWL2 248 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 CHPFQ8IZ52 775 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 CFAP36Q96G28 342 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 SRPK1Q96SB4 655 aaKnown RBP15.57■□□□□ 0.08
UPF1-206ENST00000598471 RUFY1Q96T51 708 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 TMEM245Q9H330 911 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 SUV39H2Q9H5I1 410 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 VIPAS39Q9H9C1 493 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 SORCS3Q9UPU3 1222 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 PCDHB9Q9Y5E1 797 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.57■□□□□ 0.08
UPF1-206ENST00000598471 UNC80Q8N2C7 3258 aa15.57■□□□□ 0.08
UPF1-206ENST00000598471 MIA3Q5JRA6 1907 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 A0A087WUV0 522 aaPredicted RBP15.56■□□□□ 0.08
UPF1-206ENST00000598471 ATP8B1O43520 1251 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 FZD6O60353 706 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 PIGNO95427 931 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 PRNPP04156 253 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 UGT2B4P06133 528 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 POLBP06746 335 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 EPHX1P07099 455 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 TPH1P17752 444 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 ADRA1DP25100 572 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 IL12RB1P42701 662 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 POLR2LP62875 67 aaKnown RBP15.56■□□□□ 0.08
UPF1-206ENST00000598471 SEPT6Q14141 434 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 ELAVL3Q14576 367 aaKnown RBP15.56■□□□□ 0.08
UPF1-206ENST00000598471 POU6F1Q14863 301 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 MLF2Q15773 248 aaPredicted RBP15.56■□□□□ 0.08
UPF1-206ENST00000598471 UAP1Q16222 522 aaPredicted RBP15.56■□□□□ 0.08
UPF1-206ENST00000598471 FBXO43Q4G163 708 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 ALS2CLQ60I27 953 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 TPRG1Q6ZUI0 275 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 NLRP9Q7RTR0 991 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 MPP5Q8N3R9 675 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 CHST14Q8NCH0 376 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 GRIN3AQ8TCU5 1115 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 FAM3CQ92520 227 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 PTPRN2Q92932 1015 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 NSMCE3Q96MG7 304 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 RANBP9Q96S59 729 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 CCDC77Q9BR77 488 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 MRM3Q9HC36 420 aaKnown RBP15.56■□□□□ 0.08
UPF1-206ENST00000598471 FBRSL1Q9HCM7 1045 aaKnown RBP15.56■□□□□ 0.08
UPF1-206ENST00000598471 HACD3Q9P035 362 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 SOX13Q9UN79 622 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 TCAF1Q9Y4C2 921 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 STON1Q9Y6Q2 735 aa15.56■□□□□ 0.08
UPF1-206ENST00000598471 MUC22E2RYF6 1773 aaPredicted RBP15.56■□□□□ 0.08
UPF1-206ENST00000598471 FAM237BA0A1B0GVD1 139 aa15.55■□□□□ 0.08
UPF1-206ENST00000598471 ANKRD66B4E2M5 251 aa15.55■□□□□ 0.08
UPF1-206ENST00000598471 K7EQS6 105 aa15.55■□□□□ 0.08
UPF1-206ENST00000598471 TRAFD1O14545 582 aaPredicted RBP15.55■□□□□ 0.08
UPF1-206ENST00000598471 SIN3BO75182 1162 aa15.55■□□□□ 0.08
UPF1-206ENST00000598471 EGFP01133 1207 aa15.55■□□□□ 0.08
UPF1-206ENST00000598471 PRLP01236 227 aa15.55■□□□□ 0.08
UPF1-206ENST00000598471 IVLP07476 585 aa15.55■□□□□ 0.08
UPF1-206ENST00000598471 NUDT17P0C025 328 aa15.55■□□□□ 0.08
UPF1-206ENST00000598471 HLA-EP13747 358 aa15.55■□□□□ 0.08
UPF1-206ENST00000598471 PRKCHP24723 683 aa15.55■□□□□ 0.08
UPF1-206ENST00000598471 GKP32189 559 aa15.55■□□□□ 0.08
UPF1-206ENST00000598471 STX2P32856 288 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms