RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 HS3ST3A1Q9Y663 406 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 TRPM6Q9BX84 2022 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 FPGTO14772 594 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 MUSKO15146 869 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 RFPL3O75679 317 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 PALMO75781 387 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 PIAS2O75928 621 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 NEBLO76041 1014 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 RARAP10276 462 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 AMPD1P23109 780 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 IGFALSP35858 605 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 PDE1CQ14123 709 aaPredicted RBP13.9□□□□□ -0.18
SCAF1-203ENST00000598359 PROX2Q3B8N5 592 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 ZSWIM9Q86XI8 627 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 LRRC8AQ8IWT6 810 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 CXorf40AQ8TE69 158 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 NSMCE3Q96MG7 304 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 ZNF830Q96NB3 372 aaPredicted RBP13.9□□□□□ -0.18
SCAF1-203ENST00000598359 LENG8Q96PV6 779 aaPredicted RBP13.9□□□□□ -0.18
SCAF1-203ENST00000598359 NUP85Q9BW27 656 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 SP110Q9HB58 689 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 MBNL1Q9NR56 388 aaKnown RBP13.9□□□□□ -0.18
SCAF1-203ENST00000598359 GPR27Q9NS67 375 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 IPO11Q9UI26 975 aaKnown RBP13.9□□□□□ -0.18
SCAF1-203ENST00000598359 KLF15Q9UIH9 416 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 ANAPC7Q9UJX3 599 aa13.9□□□□□ -0.18
SCAF1-203ENST00000598359 BZW2Q9Y6E2 419 aaKnown RBP13.9□□□□□ -0.18
SCAF1-203ENST00000598359 CELSR3Q9NYQ7 3312 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 SHROOM3Q8TF72 1996 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 SPTY2D1-AS1A0A0U1RR47 76 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 EIF3CLB5ME19 914 aaKnown RBP13.89□□□□□ -0.19
SCAF1-203ENST00000598359 CYP1A2P05177 515 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 GIMD1P0DJR0 217 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 CKMT2P17540 419 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 XPAP23025 273 aaPredicted RBP13.89□□□□□ -0.19
SCAF1-203ENST00000598359 PCK1P35558 622 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 RABIFP47224 123 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 CCDC122Q5T0U0 273 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 ALKBH5Q6P6C2 394 aaKnown RBP13.89□□□□□ -0.19
SCAF1-203ENST00000598359 POLNQ7Z5Q5 900 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 SRLQ86TD4 932 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 PSTKQ8IV42 348 aaKnown RBP13.89□□□□□ -0.19
SCAF1-203ENST00000598359 VSTM4Q8IW00 320 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 GALNT15Q8N3T1 639 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 CENPTQ96BT3 561 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 EIF3CQ99613 913 aaKnown RBP13.89□□□□□ -0.19
SCAF1-203ENST00000598359 CINPQ9BW66 212 aaPredicted RBP13.89□□□□□ -0.19
SCAF1-203ENST00000598359 CPEB1Q9BZB8 566 aaKnown RBP13.89□□□□□ -0.19
SCAF1-203ENST00000598359 TCEAL2Q9H3H9 227 aaPredicted RBP13.89□□□□□ -0.19
SCAF1-203ENST00000598359 SUV39H2Q9H5I1 410 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 PCDH12Q9NPG4 1184 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 KCND1Q9NSA2 647 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 DKK3Q9UBP4 350 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 PNMA8BQ9ULN7 279 aaPredicted RBP13.89□□□□□ -0.19
SCAF1-203ENST00000598359 PYCARDQ9ULZ3 195 aa13.89□□□□□ -0.19
SCAF1-203ENST00000598359 TRABD2BA6NFA1 517 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 H3BRJ5 948 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 TM7SF2O76062 418 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 GJC1P36383 396 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 EIF4A3P38919 411 aaKnown RBP13.88□□□□□ -0.19
SCAF1-203ENST00000598359 SSR1P43307 286 aaKnown RBP13.88□□□□□ -0.19
SCAF1-203ENST00000598359 HCAR3P49019 387 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 PFN3P60673 137 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 SLC25A11Q02978 314 aaKnown RBP13.88□□□□□ -0.19
SCAF1-203ENST00000598359 CYP4F3Q08477 520 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 EIF2B5Q13144 721 aaKnown RBP13.88□□□□□ -0.19
SCAF1-203ENST00000598359 MMRN1Q13201 1228 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 ZNF211Q13398 564 aaPredicted RBP13.88□□□□□ -0.19
SCAF1-203ENST00000598359 CAMK2BQ13554 666 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 DPYSL2Q16555 572 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 UGP2Q16851 508 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 HES3Q5TGS1 186 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 C19orf48Q6RUI8 117 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 NYAP1Q6ZVC0 841 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 PROSER1Q86XN7 944 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 RBFAQ8N0V3 343 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 OR4C6Q8NH72 309 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 ASB12Q8WXK4 309 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 CSPG4P5Q96PW8 444 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 PACSIN1Q9BY11 444 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 CCDC86Q9H6F5 360 aaKnown RBP13.88□□□□□ -0.19
SCAF1-203ENST00000598359 PCDH18Q9HCL0 1135 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 DONSONQ9NYP3 566 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 PCDHGA1Q9Y5H4 931 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 ACACAQ13085 2346 aa13.88□□□□□ -0.19
SCAF1-203ENST00000598359 TDRD6O60522 2096 aaKnown RBP13.87□□□□□ -0.19
SCAF1-203ENST00000598359 ARID1BQ8NFD5 2236 aaPredicted RBP13.87□□□□□ -0.19
SCAF1-203ENST00000598359 TSPAN11A1L157 253 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 CSF2P04141 144 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 CD48P09326 243 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 JUPP14923 745 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 JUNDP17535 347 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 ARL4AP40617 200 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 CCZ1BP86790 482 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 CCZ1P86791 482 aaPredicted RBP13.87□□□□□ -0.19
SCAF1-203ENST00000598359 DAB2P98082 770 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 IL10RBQ08334 325 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 SLC10A7Q0GE19 358 aa13.87□□□□□ -0.19
SCAF1-203ENST00000598359 PIGHQ14442 188 aaPredicted RBP13.87□□□□□ -0.19
SCAF1-203ENST00000598359 IRF4Q15306 451 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms