RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ELP6Q0PNE2 266 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 ILKQ13418 452 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 BRAT1Q6PJG6 821 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 TMCO3Q6UWJ1 677 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 ZSWIM9Q86XI8 627 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 OR8K1Q8NGG5 319 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 NSMCE3Q96MG7 304 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 ZNF599Q96NL3 588 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 CINPQ9BW66 212 aaPredicted RBP15.21■□□□□ 0.03
LIG1-215ENST00000597901 CCDC86Q9H6F5 360 aaKnown RBP15.21■□□□□ 0.03
LIG1-215ENST00000597901 ATP13A3Q9H7F0 1226 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 PCDH18Q9HCL0 1135 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 PCDH12Q9NPG4 1184 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.21■□□□□ 0.03
LIG1-215ENST00000597901 NENFQ9UMX5 172 aa15.21■□□□□ 0.03
LIG1-215ENST00000597901 MUSKO15146 869 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 CBFA2T2O43439 604 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 NME1P15531 152 aaKnown RBP15.2■□□□□ 0.02
LIG1-215ENST00000597901 SSR1P43307 286 aaKnown RBP15.2■□□□□ 0.02
LIG1-215ENST00000597901 SCNN1BP51168 640 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 RENBPP51606 427 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 CLDN6P56747 220 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 YPEL5P62699 121 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 SEMG2Q02383 582 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 SLC25A11Q02978 314 aaKnown RBP15.2■□□□□ 0.02
LIG1-215ENST00000597901 BCL2L1Q07817 233 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 EIF2B5Q13144 721 aaKnown RBP15.2■□□□□ 0.02
LIG1-215ENST00000597901 PTK2BQ14289 1009 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 LBRQ14739 615 aaKnown RBP15.2■□□□□ 0.02
LIG1-215ENST00000597901 HS1BP3Q53T59 392 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 CFAP58Q5T655 872 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 SPECC1LQ69YQ0 1117 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 ERAP2Q6P179 960 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 PARGQ86W56 976 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 PROSER1Q86XN7 944 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 PDCD7Q8N8D1 485 aaKnown RBP15.2■□□□□ 0.02
LIG1-215ENST00000597901 TP53I13Q8NBR0 393 aaPredicted RBP15.2■□□□□ 0.02
LIG1-215ENST00000597901 PSKH2Q96QS6 385 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 C1QTNF7Q9BXJ2 289 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 SEPT3Q9UH03 358 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 COQ6Q9Y2Z9 468 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 CHD5Q8TDI0 1954 aa15.2■□□□□ 0.02
LIG1-215ENST00000597901 TTC24A2A3L6 582 aaPredicted RBP15.19■□□□□ 0.02
LIG1-215ENST00000597901 K7ESM1 405 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 TOR1BO14657 336 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 MAFKO60675 156 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 NEBLO76041 1014 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 PEX11BO96011 259 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 PRKCGP05129 697 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 ALPPL2P10696 532 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 JUNDP17535 347 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 SERPINA4P29622 427 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 IGFALSP35858 605 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 LIG3P49916 1009 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 THOP1P52888 689 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 CDH6P55285 790 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 POLR2LP62875 67 aaKnown RBP15.19■□□□□ 0.02
LIG1-215ENST00000597901 DAB2P98082 770 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 E2F1Q01094 437 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 LRRC14Q15048 493 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 HADHQ16836 314 aaKnown RBP15.19■□□□□ 0.02
LIG1-215ENST00000597901 ASTE1Q2TB18 679 aaPredicted RBP15.19■□□□□ 0.02
LIG1-215ENST00000597901 WSCD2Q2TBF2 565 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 ATP13A4Q4VNC1 1196 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 MDM1Q8TC05 714 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 FAM71BQ8TC56 605 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 ECHDC3Q96DC8 303 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 APOLD1Q96LR9 279 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 TSPY26PQ9H489 355 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 NLGN3Q9NZ94 848 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 CTTNBP2NLQ9P2B4 639 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 ATP8A1Q9Y2Q0 1164 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 CSNK1G3Q9Y6M4 447 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 DOCK9Q9BZ29 2069 aa15.19■□□□□ 0.02
LIG1-215ENST00000597901 CFAP69A5D8W1 941 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 H3BM21 787 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 TRAFD1O14545 582 aaPredicted RBP15.18■□□□□ 0.02
LIG1-215ENST00000597901 LZTS3O60299 673 aaPredicted RBP15.18■□□□□ 0.02
LIG1-215ENST00000597901 H2AFZP0C0S5 128 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 CKMT1AP12532 417 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 MYF5P13349 255 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 C6P13671 934 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 ARSEP51690 589 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 CYP4F3Q08477 520 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 TARDBPQ13148 414 aaKnown RBP eCLIP15.18■□□□□ 0.02
LIG1-215ENST00000597901 MMRN1Q13201 1228 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 KRT81Q14533 505 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 SLC18A3Q16572 532 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 TMCO4Q5TGY1 634 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 H2AFVQ71UI9 128 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 CPNE8Q86YQ8 564 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 FAM181AQ8N9Y4 354 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 ZNF548Q8NEK5 533 aaPredicted RBP15.18■□□□□ 0.02
LIG1-215ENST00000597901 ZNF564Q8TBZ8 553 aaPredicted RBP15.18■□□□□ 0.02
LIG1-215ENST00000597901 LMX1AQ8TE12 382 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 BTN2A2Q8WVV5 523 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 DNAJC7Q99615 494 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 DUSP23Q9BVJ7 150 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 PACSIN1Q9BY11 444 aa15.18■□□□□ 0.02
LIG1-215ENST00000597901 FRYQ5TBA9 3013 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms