RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 PRUNE1Q86TP1 453 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 ZBTB44Q8NCP5 570 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 SGK2Q9HBY8 427 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 MBD1Q9UIS9 605 aaPredicted RBP22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 CDC23Q9UJX2 597 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 TSPAN11A1L157 253 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 SLC7A4O43246 635 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 ANXA9O76027 345 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 PGLSO95336 258 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 CPP00450 1065 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 FNTAP49354 379 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 GEMP55040 296 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 TCF15Q12870 199 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 UGP2Q16851 508 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 LRRC73Q5JTD7 316 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 ZC3H14Q6PJT7 736 aaKnown RBP22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 ZSWIM9Q86XI8 627 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 KLHL7Q8IXQ5 586 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 ECHDC3Q96DC8 303 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 IFT43Q96FT9 208 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 OXNAD1Q96HP4 312 aaPredicted RBP22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 GPR174Q9BXC1 333 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 TDRD1Q9BXT4 1180 aaKnown RBP22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 DDX47Q9H0S4 455 aaKnown RBP22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 PCDH9Q9HC56 1237 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 FEZ2Q9UHY8 353 aaPredicted RBP22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 R4GN57 208 aa22.29■■□□□ 1.16
CHMP2A-204ENST00000597848 TBC1D3DA0A087WVF3 549 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 TBC1D3IA0A087WXS9 549 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 TBC1D3EA0A087X179 549 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 TBC1D3KA0A087X1G2 549 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 TBC1D3FA6NER0 549 aaPredicted RBP22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 PRR23AA6NEV1 266 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 LRRC72A6NJI9 287 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 UPK3BL1B0FP48 263 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 TBC1D3LB9A6J9 549 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 UPK3BL2E5RIL1 263 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 NEMP1O14524 444 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 SEMA4FO95754 770 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 PDHA1P08559 390 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 TBC1D3HP0C7X1 549 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 ZSCAN5DPP0CG00 497 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 BCKDHBP21953 392 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 TNNT3P45378 269 aaPredicted RBP22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 EPHB1P54762 984 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 PTPN5P54829 565 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 ADPRHP54922 357 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 WNT3AP56704 352 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 RPL6Q02878 288 aaKnown RBP22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 SLC14A2Q15849 920 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 TBC1D3GQ6DHY5 549 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 TBC1D3CQ6IPX1 549 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 C11orf74Q86VG3 221 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 TBC1D3Q8IZP1 549 aaPredicted RBP22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 GLIS1Q8NBF1 620 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 GRK7Q8WTQ7 553 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 ATOH1Q92858 354 aaPredicted RBP22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 RAB7BQ96AH8 199 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 PPP1R2P1Q96PQ5 205 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 IRF2BPLQ9H1B7 796 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 KCNH6Q9H252 994 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 VPS45Q9NRW7 570 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 PAK5Q9P286 719 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 PHTF1Q9UMS5 762 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 AAR2Q9Y312 384 aaKnown RBP22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 HCN4Q9Y3Q4 1203 aa22.28■■□□□ 1.16
CHMP2A-204ENST00000597848 ESPNB1AK53 854 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 CCDC188H7C350 402 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 PLRG1O43660 514 aaKnown RBP22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 METTL18O95568 372 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 PRKCGP05129 697 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 ITIH2P19823 946 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 RPL22P35268 128 aaKnown RBP22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 ABL2P42684 1182 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 SUOXP51687 545 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 FAM193AP78312 1265 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 CDK18Q07002 472 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 CKAP4Q07065 602 aaKnown RBP22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 MPP3Q13368 585 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 SIM2Q14190 667 aaPredicted RBP22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 FAXCQ5TGI0 409 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 CCDC70Q6NSX1 233 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 ERAP2Q6P179 960 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 NDUFAF2Q8N183 169 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 DEFB119Q8N690 84 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 LPCAT1Q8NF37 534 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 IPMKQ8NFU5 416 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 FAM131CQ96AQ9 280 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 TADA1Q96BN2 335 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 ADGRE3Q9BY15 652 aa22.27■■□□□ 1.16
CHMP2A-204ENST00000597848 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.26■■□□□ 1.15
CHMP2A-204ENST00000597848 GOLGA6CA6NDK9 693 aa22.26■■□□□ 1.15
CHMP2A-204ENST00000597848 GOLGA6BA6NDN3 693 aa22.26■■□□□ 1.15
CHMP2A-204ENST00000597848 FZD6O60353 706 aa22.26■■□□□ 1.15
CHMP2A-204ENST00000597848 LILRB5O75023 590 aa22.26■■□□□ 1.15
CHMP2A-204ENST00000597848 PCDH8O95206 1070 aa22.26■■□□□ 1.15
CHMP2A-204ENST00000597848 GAS8O95995 478 aa22.26■■□□□ 1.15
CHMP2A-204ENST00000597848 KRT14P02533 472 aa22.26■■□□□ 1.15
CHMP2A-204ENST00000597848 GOLGA6DP0CG33 693 aa22.26■■□□□ 1.15
CHMP2A-204ENST00000597848 TAS2R38P59533 333 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms