RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 TBC1D3KA0A087X1G2 549 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 TBC1D3FA6NER0 549 aaPredicted RBP10.02□□□□□ -0.81
TPM4-216ENST00000592822 PRR23AA6NEV1 266 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 LRRC72A6NJI9 287 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 UPK3BL1B0FP48 263 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 TBC1D3LB9A6J9 549 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 UPK3BL2E5RIL1 263 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 CES2O00748 559 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 FZD6O60353 706 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 FSBPO95073 299 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 PGLSO95336 258 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 LMNAP02545 664 aaKnown RBP10.02□□□□□ -0.81
TPM4-216ENST00000592822 SERPINF2P08697 491 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 TBC1D3HP0C7X1 549 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 PRLRP16471 622 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 NFKB1P19838 968 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 ITPKAP23677 461 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 GDF10P55107 478 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 ETF1P62495 437 aaKnown RBP10.02□□□□□ -0.81
TPM4-216ENST00000592822 PPP2CBP62714 309 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 PPP2CAP67775 309 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 SNX1Q13596 522 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 OASLQ15646 514 aaKnown RBP10.02□□□□□ -0.81
TPM4-216ENST00000592822 CCNG2Q16589 344 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 UGP2Q16851 508 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 ANKRD20A2Q5SQ80 823 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 CFAP58Q5T655 872 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 ANKRD20A1Q5TYW2 823 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 ANKRD20A3Q5VUR7 823 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 LYSMD4Q5XG99 296 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 TBC1D3GQ6DHY5 549 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 LAIR1Q6GTX8 287 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 TBC1D3CQ6IPX1 549 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 NEK5Q6P3R8 708 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 BRAT1Q6PJG6 821 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 PID1Q7Z2X4 250 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 TBC1D3Q8IZP1 549 aaPredicted RBP10.02□□□□□ -0.81
TPM4-216ENST00000592822 PRELID2Q8N945 189 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 FAM71DQ8N9W8 422 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 SPATA22Q8NHS9 363 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 PDCD6IPQ8WUM4 868 aaKnown RBP10.02□□□□□ -0.81
TPM4-216ENST00000592822 MAIP1Q8WWC4 291 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 BIRC7Q96CA5 298 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 LOXL4Q96JB6 756 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 RBM15Q96T37 977 aaKnown RBP eCLIP10.02□□□□□ -0.81
TPM4-216ENST00000592822 NAPGQ99747 312 aaPredicted RBP10.02□□□□□ -0.81
TPM4-216ENST00000592822 FERMT1Q9BQL6 677 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 ORAI3Q9BRQ5 295 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 TMEM121Q9BTD3 319 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 TDRD1Q9BXT4 1180 aaKnown RBP10.02□□□□□ -0.81
TPM4-216ENST00000592822 PREBQ9HCU5 417 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 PCDH12Q9NPG4 1184 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 KLHL8Q9P2G9 620 aaPredicted RBP10.02□□□□□ -0.81
TPM4-216ENST00000592822 TRHDEQ9UKU6 1024 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 RAB23Q9ULC3 237 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 ZKSCAN5Q9Y2L8 839 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.02□□□□□ -0.81
TPM4-216ENST00000592822 PCDHB9Q9Y5E1 797 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 DMDP11532 3685 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 PLXNA2O75051 1894 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 USP34Q70CQ2 3546 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 RALGAPA1Q6GYQ0 2036 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 TRPM6Q9BX84 2022 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 A0A1W2PQ67 120 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 A0A1W2PQU0 124 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 CTAGE9A4FU28 777 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 C5orf60A6NFR6 353 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 MEI4A8MW99 385 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 F5H423 210 aaPredicted RBP10.01□□□□□ -0.81
TPM4-216ENST00000592822 RIOK3O14730 519 aaKnown RBP10.01□□□□□ -0.81
TPM4-216ENST00000592822 LATO43561 262 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 TSPAN6O43657 245 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 RNGTTO60942 597 aaKnown RBP10.01□□□□□ -0.81
TPM4-216ENST00000592822 GCATO75600 419 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 ZNF189O75820 626 aaPredicted RBP10.01□□□□□ -0.81
TPM4-216ENST00000592822 STK10O94804 968 aaKnown RBP10.01□□□□□ -0.81
TPM4-216ENST00000592822 PCDH8O95206 1070 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 EPN2O95208 641 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 MT-CYBP00156 380 aaPredicted RBP10.01□□□□□ -0.81
TPM4-216ENST00000592822 CPP00450 1065 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 PRLP01236 227 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 PRKCGP05129 697 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 PDHA1P08559 390 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 TCP1P17987 556 aaKnown RBP10.01□□□□□ -0.81
TPM4-216ENST00000592822 MAOBP27338 520 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 CCR5P51681 352 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 SUOXP51687 545 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 POLR2LP62875 67 aaKnown RBP10.01□□□□□ -0.81
TPM4-216ENST00000592822 SEMG2Q02383 582 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 PTPRRQ15256 657 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 ZNF284Q2VY69 593 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 TMEM259Q4ZIN3 620 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 SYCP2LQ5T4T6 812 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 ARMC12Q5T9G4 340 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 SEL1L3Q68CR1 1132 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 DRICH1Q6PGQ1 229 aaPredicted RBP10.01□□□□□ -0.81
TPM4-216ENST00000592822 KDELC1Q6UW63 502 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 NYAP1Q6ZVC0 841 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 ASCL5Q7RTU5 278 aa10.01□□□□□ -0.81
TPM4-216ENST00000592822 TRIM69Q86WT6 500 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms