RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 INSIG1O15503 277 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 EFSO43281 561 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 TNFSF15O95150 251 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 ANXA6P08133 673 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 ERCC5P28715 1186 aaPredicted RBP18.62■□□□□ 0.57
CCDC43-204ENST00000588687 HK3P52790 923 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 JAM2P57087 298 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 PPARDQ03181 441 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 SPIDRQ14159 915 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 TPD52L1Q16890 204 aaPredicted RBP18.62■□□□□ 0.57
CCDC43-204ENST00000588687 WSCD2Q2TBF2 565 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 TMEM52BQ4KMG9 183 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 PHLDB2Q86SQ0 1253 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 TTC7BQ86TV6 843 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 PYROXD2Q8N2H3 581 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 ARL14Q8N4G2 192 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 RTL3Q8N8U3 475 aaKnown RBP18.62■□□□□ 0.57
CCDC43-204ENST00000588687 SLC30A5Q8TAD4 765 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 FAM172AQ8WUF8 416 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 CASKIN2Q8WXE0 1202 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 GLMNQ92990 594 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 COL26A1Q96A83 441 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 CCDC97Q96F63 343 aaPredicted RBP18.62■□□□□ 0.57
CCDC43-204ENST00000588687 MED8Q96G25 268 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 WRAP53Q9BUR4 548 aaKnown RBP18.62■□□□□ 0.57
CCDC43-204ENST00000588687 SAMSN1Q9NSI8 373 aaKnown RBP18.62■□□□□ 0.57
CCDC43-204ENST00000588687 HPCAL4Q9UM19 191 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 SPTA1P02549 2419 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 A0A1W2PQM1 296 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 EPHB6O15197 1021 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 GFPT2O94808 682 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 IGSF6O95976 241 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 UNGP13051 313 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-204ENST00000588687 RFC1P35251 1148 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-204ENST00000588687 KLK7P49862 253 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 INO80DQ53TQ3 878 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-204ENST00000588687 FAXCQ5TGI0 409 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 FSTL5Q8N475 847 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-204ENST00000588687 CXorf40AQ8TE69 158 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 CCDC74AQ96AQ1 378 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 HMCESQ96FZ2 354 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 PCDHB18PQ96TA0 734 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 C1QTNF7Q9BXJ2 289 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 CLSTN2Q9H4D0 955 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 PDFQ9HBH1 243 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 ACSL6Q9UKU0 697 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 ATXN7L1Q9ULK2 861 aaPredicted RBP18.61■□□□□ 0.57
CCDC43-204ENST00000588687 COQ6Q9Y2Z9 468 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 PCDHGA7Q9Y5G6 932 aa18.61■□□□□ 0.57
CCDC43-204ENST00000588687 PTPN13Q12923 2485 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 NAV2Q8IVL1 2488 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 TCRBV5S1A1TA0A578 114 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 PLD2O14939 933 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 BUB1O43683 1085 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 PIGNO95427 931 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 PEX5P50542 639 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 RHOAP61586 193 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 NFATC4Q14934 902 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 AGERQ15109 404 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 TCP11X2Q5H9J9 407 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 ESRP1Q6NXG1 681 aaKnown RBP18.6■□□□□ 0.57
CCDC43-204ENST00000588687 FOXR1Q6PIV2 292 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 LVRNQ6Q4G3 990 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 ZSWIM9Q86XI8 627 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 TSACCQ96A04 125 aaPredicted RBP18.6■□□□□ 0.57
CCDC43-204ENST00000588687 EXOC2Q96KP1 924 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 CPEB1Q9BZB8 566 aaKnown RBP18.6■□□□□ 0.57
CCDC43-204ENST00000588687 EDEM3Q9BZQ6 932 aa18.6■□□□□ 0.57
CCDC43-204ENST00000588687 CYSRT1A8MQ03 144 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 WASH4PA8MWX3 477 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 NOBOXO60393 691 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 KRT10P13645 584 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 MMP12P39900 470 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 SERINC3Q13530 473 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 LRRC14Q15048 493 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 ELOCQ15369 112 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 CYTH1Q15438 398 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 TCEA2Q15560 299 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 CCDC81Q6ZN84 652 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 PDXPQ96GD0 296 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 PCDH12Q9NPG4 1184 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 TAB2Q9NYJ8 693 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 SIRPGQ9P1W8 387 aa18.59■□□□□ 0.57
CCDC43-204ENST00000588687 SPENQ96T58 3664 aaKnown RBP18.59■□□□□ 0.57
CCDC43-204ENST00000588687 RASA4BC9J798 803 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 PYCARD-AS1I3L0S3 204 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 RASA4O43374 803 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 EEF1GP26641 437 aaKnown RBP18.58■□□□□ 0.56
CCDC43-204ENST00000588687 EPHB2P29323 1055 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 CCKBRP32239 447 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 UGT1A5P35504 534 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 SOX5P35711 763 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 BLKP51451 505 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 SUOXP51687 545 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 YBEYP58557 167 aaPredicted RBP18.58■□□□□ 0.56
CCDC43-204ENST00000588687 SRSF6Q13247 344 aaKnown RBP18.58■□□□□ 0.56
CCDC43-204ENST00000588687 EIF3IQ13347 325 aaKnown RBP18.58■□□□□ 0.56
CCDC43-204ENST00000588687 UGP2Q16851 508 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 PARP15Q460N3 678 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 WDR59Q6PJI9 974 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms