RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 RAD51Q06609 339 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 SGCGQ13326 291 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 SMAD1Q15797 465 aaKnown RBP16.26■□□□□ 0.19
CXXC1-209ENST00000587342 TMEM52BQ4KMG9 183 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 ATP13A4Q4VNC1 1196 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 BOLA3Q53S33 107 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 SPECC1LQ69YQ0 1117 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 NYAP1Q6ZVC0 841 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 SRLQ86TD4 932 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 PGBD5Q8N414 524 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 TP53I13Q8NBR0 393 aaPredicted RBP16.26■□□□□ 0.19
CXXC1-209ENST00000587342 DENND6BQ8NEG7 585 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 ZNF564Q8TBZ8 553 aaPredicted RBP16.26■□□□□ 0.19
CXXC1-209ENST00000587342 FAM71BQ8TC56 605 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 SUV39H2Q9H5I1 410 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 DONSONQ9NYP3 566 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.26■□□□□ 0.19
CXXC1-209ENST00000587342 CFAP47Q6ZTR5 3102 aa16.26■□□□□ 0.19
CXXC1-209ENST00000587342 LY6G6EA0A0G2JKS1 128 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 TMEM8BA6NDV4 472 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 FPGTO14772 594 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 MYF5P13349 255 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 NME1P15531 152 aaKnown RBP16.25■□□□□ 0.19
CXXC1-209ENST00000587342 ARL4AP40617 200 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 RABIFP47224 123 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 CSNK1DP48730 415 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 RALGDSQ12967 914 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 EIF2B5Q13144 721 aaKnown RBP16.25■□□□□ 0.19
CXXC1-209ENST00000587342 CAMK2BQ13554 666 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 PDE1CQ14123 709 aaPredicted RBP16.25■□□□□ 0.19
CXXC1-209ENST00000587342 IRF4Q15306 451 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 SLC18A3Q16572 532 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 UGP2Q16851 508 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 TMCO3Q6UWJ1 677 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 ZSCAN30Q86W11 494 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 ZNF548Q8NEK5 533 aaPredicted RBP16.25■□□□□ 0.19
CXXC1-209ENST00000587342 ECHDC3Q96DC8 303 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 PSKH2Q96QS6 385 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 TUBGCP5Q96RT8 1024 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 CINPQ9BW66 212 aaPredicted RBP16.25■□□□□ 0.19
CXXC1-209ENST00000587342 TCEAL2Q9H3H9 227 aaPredicted RBP16.25■□□□□ 0.19
CXXC1-209ENST00000587342 DNAJC28Q9NX36 388 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 U3KQA8 63 aa16.25■□□□□ 0.19
CXXC1-209ENST00000587342 TDRD6O60522 2096 aaKnown RBP16.24■□□□□ 0.19
CXXC1-209ENST00000587342 TRAFD1O14545 582 aaPredicted RBP16.24■□□□□ 0.19
CXXC1-209ENST00000587342 RIOK3O14730 519 aaKnown RBP16.24■□□□□ 0.19
CXXC1-209ENST00000587342 MFSD11O43934 449 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 MAFKO60675 156 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 MFAP3LO75121 409 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 RFPL3O75679 317 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 NEBLO76041 1014 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 C6P13671 934 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 CR2P20023 1033 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 GJC1P36383 396 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 CDH6P55285 790 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 DPYSL3Q14195 570 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 LBRQ14739 615 aaKnown RBP16.24■□□□□ 0.19
CXXC1-209ENST00000587342 TMCO4Q5TGY1 634 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 PARGQ86W56 976 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 RBFAQ8N0V3 343 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 LZTR1Q8N653 840 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 OR8K1Q8NGG5 319 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 OR4C6Q8NH72 309 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 CXorf40AQ8TE69 158 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 IFT43Q96FT9 208 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 ZNF641Q96N77 438 aaPredicted RBP16.24■□□□□ 0.19
CXXC1-209ENST00000587342 CHP1Q99653 195 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 ABHD10Q9NUJ1 306 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 ATP8A1Q9Y2Q0 1164 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 PCDHGA1Q9Y5H4 931 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 ITPR1Q14643 2758 aa16.24■□□□□ 0.19
CXXC1-209ENST00000587342 DSPP15924 2871 aaKnown RBP16.24■□□□□ 0.19
CXXC1-209ENST00000587342 GOLGA4Q13439 2230 aaKnown RBP16.23■□□□□ 0.19
CXXC1-209ENST00000587342 SRRM3A6NNA2 597 aaPredicted RBP16.23■□□□□ 0.19
CXXC1-209ENST00000587342 MYO1FO00160 1098 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 CBFA2T2O43439 604 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 TM7SF2O76062 418 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 PROSCO94903 275 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 CSF2P04141 144 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 TPM3P06753 285 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 GM2AP17900 193 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 LIG3P49916 1009 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 ADKP55263 362 aaKnown RBP16.23■□□□□ 0.19
CXXC1-209ENST00000587342 ZNF211Q13398 564 aaPredicted RBP16.23■□□□□ 0.19
CXXC1-209ENST00000587342 RFTN1Q14699 578 aaPredicted RBP16.23■□□□□ 0.19
CXXC1-209ENST00000587342 WSCD2Q2TBF2 565 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 KCTD16Q68DU8 428 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 BRAT1Q6PJG6 821 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 PCDH19Q8TAB3 1148 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 FAM174AQ8TBP5 190 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 MDM1Q8TC05 714 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 HCAR2Q8TDS4 363 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 ZNF599Q96NL3 588 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 ATP13A3Q9H7F0 1226 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 SPTLC3Q9NUV7 552 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 CTTNBP2NLQ9P2B4 639 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 SEPT3Q9UH03 358 aa16.23■□□□□ 0.19
CXXC1-209ENST00000587342 LRP4O75096 1905 aa16.22■□□□□ 0.19
CXXC1-209ENST00000587342 SSU72P8A0A1W2PR75 194 aa16.22■□□□□ 0.19
CXXC1-209ENST00000587342 MAP3K6O95382 1288 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms