RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ARL13BQ3SXY8 428 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 POM121L1PQ3SYA9 428 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 CCDC14Q49A88 953 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 FAM133BQ5BKY9 247 aaKnown RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 FSCBQ5H9T9 825 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 ADGRF1Q5T601 910 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 ERMARDQ5T6L9 678 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 ZNF776Q68DI1 518 aaPredicted RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 PM20D1Q6GTS8 502 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 PCSK4Q6UW60 755 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 MFSD7Q6UXD7 560 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 LRIG3Q6UXM1 1119 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 GSTA5Q7RTV2 222 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 KIAA0907Q7Z7F0 614 aaPredicted RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 SCUBE3Q8IX30 993 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 ARHGAP18Q8N392 663 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 CARNMT1Q8N4J0 409 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 ZNF276Q8N554 614 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 AADATQ8N5Z0 425 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 RNF139Q8WU17 664 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 COL26A1Q96A83 441 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 FAM149B1Q96BN6 582 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 PGAP3Q96FM1 320 aaPredicted RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 LMLNQ96KR4 655 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 RPL10LQ96L21 214 aaKnown RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 MRGPRX3Q96LB0 322 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 SLC2A13Q96QE2 648 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 CDK5RAP1Q96SZ6 601 aaKnown RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 ELF4Q99607 663 aaPredicted RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 CALN1Q9BXU9 219 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 ACE2Q9BYF1 805 aaPredicted RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 SLC2A11Q9BYW1 496 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 PHACTR1Q9C0D0 580 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 PABPC3Q9H361 631 aaKnown RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 PCDH9Q9HC56 1237 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.97□□□□□ -1.13
VMP1-204ENST00000587259 TJP2Q9UDY2 1190 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 HPCAL4Q9UM19 191 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 CFAP46Q8IYW2 2715 aa7.97□□□□□ -1.13
VMP1-204ENST00000587259 TP53BP1Q12888 1972 aaPredicted RBP7.97□□□□□ -1.13
VMP1-204ENST00000587259 ASH1LQ9NR48 2969 aaKnown RBP7.96□□□□□ -1.13
VMP1-204ENST00000587259 TENM4Q6N022 2769 aa7.96□□□□□ -1.13
VMP1-204ENST00000587259 A0A1W2PPC4 97 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 A0A1W2PR77 199 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 ESYT3A0FGR9 886 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 A6NNZ2 444 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 GOLGA8KD6RF30 607 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 H3BRJ5 948 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 APOL1O14791 398 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 VILLO15195 856 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 TIMM44O43615 452 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 CST8O60676 142 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 RFPL3O75679 317 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 ENDOD1O94919 500 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 MOCS2O96007 188 aaPredicted RBP7.96□□□□□ -1.14
VMP1-204ENST00000587259 MYBL2P10244 700 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 POLR2EP19388 210 aaKnown RBP7.96□□□□□ -1.14
VMP1-204ENST00000587259 MAT2AP31153 395 aaKnown RBP7.96□□□□□ -1.14
VMP1-204ENST00000587259 STIP1P31948 543 aaKnown RBP7.96□□□□□ -1.14
VMP1-204ENST00000587259 HTR7P34969 479 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 ARL4AP40617 200 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 NR2C2P49116 596 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 SULT1E1P49888 294 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 CDH6P55285 790 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 DAOAP59103 153 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 RACK1P63244 317 aaKnown RBP7.96□□□□□ -1.14
VMP1-204ENST00000587259 CST6Q15828 149 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 CDO1Q16878 200 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 SMTNL2Q2TAL5 461 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 TUBB8Q3ZCM7 444 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 TTC31Q49AM3 519 aaPredicted RBP7.96□□□□□ -1.14
VMP1-204ENST00000587259 EFHC2Q5JST6 749 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 C9orf64Q5T6V5 341 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 ACBD5Q5T8D3 534 aaPredicted RBP7.96□□□□□ -1.14
VMP1-204ENST00000587259 PIK3R6Q5UE93 754 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 KAZNQ674X7 775 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 AADACL2Q6P093 401 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 TTC27Q6P3X3 843 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 HOOK3Q86VS8 718 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 CIR1Q86X95 450 aaPredicted RBP7.96□□□□□ -1.14
VMP1-204ENST00000587259 SPATS2Q86XZ4 545 aaKnown RBP7.96□□□□□ -1.14
VMP1-204ENST00000587259 RFX6Q8HWS3 928 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 MFN1Q8IWA4 741 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 APCDD1Q8J025 514 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 CNPY4Q8N129 248 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 AHI1Q8N157 1196 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 STK40Q8N2I9 435 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.96□□□□□ -1.14
VMP1-204ENST00000587259 SAP25Q8TEE9 199 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 WFIKKN2Q8TEU8 576 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 RAPGEF5Q92565 580 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 HSPH1Q92598 858 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 P3H4Q92791 437 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 NT5C3BQ969T7 300 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 NTAN1Q96AB6 310 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 CFAP57Q96MR6 1250 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 FCRL3Q96P31 734 aaPredicted RBP7.96□□□□□ -1.14
VMP1-204ENST00000587259 UBL7Q96S82 380 aaPredicted RBP7.96□□□□□ -1.14
VMP1-204ENST00000587259 FAM129BQ96TA1 746 aa7.96□□□□□ -1.14
VMP1-204ENST00000587259 MYOCQ99972 504 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms