RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 PRLP01236 227 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 CXCL12P48061 93 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 DRG2P55039 364 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 ARMC12Q5T9G4 340 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 RNASEH2BQ5TBB1 312 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 PCGF5Q86SE9 256 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 RASSF3Q86WH2 238 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 CAMKK1Q8N5S9 505 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 PRCCQ92733 491 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 ERLEC1Q96DZ1 483 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 SIPA1Q96FS4 1042 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 ADGRE3Q9BY15 652 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 TPX2Q9ULW0 747 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 RIOK3O14730 519 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 HEXIM1O94992 359 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 APBB3O95704 486 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 SLC8A1P32418 973 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 RPL21P46778 160 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 PCSK7Q16549 785 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 TTC31Q49AM3 519 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 CFAP58Q5T655 872 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 IZUMO3Q5VZ72 239 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 NAPEPLDQ6IQ20 393 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 RANBP10Q6VN20 620 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 PARS2Q7L3T8 475 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 LINC00523Q86TU6 105 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 HOOK3Q86VS8 718 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 ZSWIM9Q86XI8 627 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 PPIL6Q8IXY8 311 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 TMEM105Q8N8V8 129 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 NAT8LQ8N9F0 302 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 BBOF1Q8ND07 529 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 FAM131CQ96AQ9 280 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 ARRDC3Q96B67 414 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 IFT43Q96FT9 208 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 HHIPQ96QV1 700 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 HDAC8Q9BY41 377 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 PABPC3Q9H361 631 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 ARNT2Q9HBZ2 717 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 DYRK4Q9NR20 520 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 PRMT8Q9NR22 394 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 CHKBQ9Y259 395 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 PCDHB9Q9Y5E1 797 aa17.1■□□□□ 0.33
PRKCSH-203ENST00000586486 KMT2EQ8IZD2 1858 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 C16orf96A6NNT2 1141 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 SMAPO00193 183 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 MID1O15344 667 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 NDST3O95803 873 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 CPP00450 1065 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 DNTTP04053 509 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 PDHA1P08559 390 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 HLA-DPA1P20036 260 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 DRD3P35462 400 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 TNNT3P45378 269 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 GRIA4P48058 902 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 LMAN1P49257 510 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 SUOXP51687 545 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 METAP1P53582 386 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 POLR2LP62875 67 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 SLC7A5Q01650 507 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 SFSWAPQ12872 951 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 AADATQ8N5Z0 425 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 MDGA1Q8NFP4 955 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 PDCD6IPQ8WUM4 868 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 HMGB4Q8WW32 186 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 PIH1D2Q8WWB5 315 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 TBL1YQ9BQ87 522 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 FICDQ9BVA6 458 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 TRIM31Q9BZY9 425 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 SLC6A17Q9H1V8 727 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 WHRNQ9P202 907 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 SHOC2Q9UQ13 582 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 PPIL1Q9Y3C6 166 aa17.09■□□□□ 0.33
PRKCSH-203ENST00000586486 K7ESF4 209 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 TMEM63AO94886 807 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 FGF1P05230 155 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 ATXN1LP0C7T5 689 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 ITIH2P19823 946 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 HOXA6P31267 233 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 NEK3P51956 506 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 MORF4L2Q15014 288 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 SLC1A5Q15758 541 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 ANO7Q6IWH7 933 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 USP30Q70CQ3 517 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 ERN2Q76MJ5 926 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 KBTBD6Q86V97 674 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 CACUL1Q86Y37 369 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 MCUQ8NE86 351 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 SPATA6Q9NWH7 488 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 USP36Q9P275 1121 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 EBF1Q9UH73 591 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 DMGDHQ9UI17 866 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 FZD4Q9ULV1 537 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 PHTF1Q9UMS5 762 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 SNX24Q9Y343 169 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 ZDBF2Q9HCK1 2354 aa17.08■□□□□ 0.32
PRKCSH-203ENST00000586486 TCRBV7S3A2A0A539 114 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 UPK3BL1B0FP48 263 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 ANKRD66B4E2M5 251 aa17.07■□□□□ 0.32
PRKCSH-203ENST00000586486 UPK3BL2E5RIL1 263 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms