RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 ZNF75DP51815 510 aa18.04■□□□□ 0.48
ERBB2-221ENST00000584888 CLDN2P57739 230 aa18.04■□□□□ 0.48
ERBB2-221ENST00000584888 RAD51Q06609 339 aa18.04■□□□□ 0.48
ERBB2-221ENST00000584888 FGL2Q14314 439 aa18.04■□□□□ 0.48
ERBB2-221ENST00000584888 RFTN1Q14699 578 aaPredicted RBP18.04■□□□□ 0.48
ERBB2-221ENST00000584888 HADHQ16836 314 aaKnown RBP18.04■□□□□ 0.48
ERBB2-221ENST00000584888 SEL1L3Q68CR1 1132 aa18.04■□□□□ 0.48
ERBB2-221ENST00000584888 FBXL19Q6PCT2 694 aa18.04■□□□□ 0.48
ERBB2-221ENST00000584888 SLC25A45Q8N413 288 aa18.04■□□□□ 0.48
ERBB2-221ENST00000584888 OR13H1Q8NG92 308 aa18.04■□□□□ 0.48
ERBB2-221ENST00000584888 HCAR2Q8TDS4 363 aa18.04■□□□□ 0.48
ERBB2-221ENST00000584888 MRFAP1L1Q96HT8 127 aa18.04■□□□□ 0.48
ERBB2-221ENST00000584888 FEM1CQ96JP0 617 aa18.04■□□□□ 0.48
ERBB2-221ENST00000584888 IPO11Q9UI26 975 aaKnown RBP18.04■□□□□ 0.48
ERBB2-221ENST00000584888 INTUQ9ULD6 942 aa18.04■□□□□ 0.48
ERBB2-221ENST00000584888 LRRK1Q38SD2 2015 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 TSPAN11A1L157 253 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 DFFAO00273 331 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 TRIM38O00635 465 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 BUB1BO60566 1050 aaPredicted RBP18.03■□□□□ 0.48
ERBB2-221ENST00000584888 LCA5LO95447 670 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 HOXB3P14651 431 aaPredicted RBP18.03■□□□□ 0.48
ERBB2-221ENST00000584888 TIMP2P16035 220 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 HNF1BP35680 557 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 RGRP47804 291 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 CDH6P55285 790 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 NSUN2Q08J23 767 aaKnown RBP eCLIP18.03■□□□□ 0.48
ERBB2-221ENST00000584888 MMRN1Q13201 1228 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 ILKQ13418 452 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 DPYSL3Q14195 570 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 COL28A1Q2UY09 1125 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 KIAA1161Q6NSJ0 714 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 TMCO3Q6UWJ1 677 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 ZSCAN30Q86W11 494 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 TSEN2Q8NCE0 465 aaKnown RBP18.03■□□□□ 0.48
ERBB2-221ENST00000584888 HNRNPLLQ8WVV9 542 aaKnown RBP18.03■□□□□ 0.48
ERBB2-221ENST00000584888 NSMCE3Q96MG7 304 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 ZNF599Q96NL3 588 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 C1QTNF2Q9BXJ5 285 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 CALN1Q9BXU9 219 aa18.03■□□□□ 0.48
ERBB2-221ENST00000584888 ADAMTS20P59510 1910 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 MUSKO15146 869 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 TSPAN6O43657 245 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 SIGLEC6O43699 453 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 MAFKO60675 156 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 PALMO75781 387 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 DGKAP23743 735 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 ARHGAP25P42331 645 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 RPS21P63220 83 aaKnown RBP18.02■□□□□ 0.48
ERBB2-221ENST00000584888 TARDBPQ13148 414 aaKnown RBP eCLIP18.02■□□□□ 0.48
ERBB2-221ENST00000584888 ZNF211Q13398 564 aaPredicted RBP18.02■□□□□ 0.48
ERBB2-221ENST00000584888 GRM3Q14832 879 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 PROX2Q3B8N5 592 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 HES3Q5TGS1 186 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 GCNT7Q6ZNI0 430 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 ABI3BPQ7Z7G0 1075 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 SRLQ86TD4 932 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 RHOT2Q8IXI1 618 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 PCDH19Q8TAB3 1148 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 ASB12Q8WXK4 309 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 FAF2Q96CS3 445 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 EXOC2Q96KP1 924 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 SLC17A9Q9BYT1 436 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 UCKL1Q9NWZ5 548 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 GGT7Q9UJ14 662 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 HS3ST3A1Q9Y663 406 aa18.02■□□□□ 0.48
ERBB2-221ENST00000584888 DSPP15924 2871 aaKnown RBP18.02■□□□□ 0.48
ERBB2-221ENST00000584888 PAK4O96013 591 aaPredicted RBP18.01■□□□□ 0.47
ERBB2-221ENST00000584888 FECHP22830 423 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 ACP1P24666 158 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 KRT81Q14533 505 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 PAFAH1B3Q15102 231 aaKnown RBP18.01■□□□□ 0.47
ERBB2-221ENST00000584888 PDK2Q15119 407 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 Q6ZSR6 202 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 SLC22A18ASQ8N1D0 253 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 RFFLQ8WZ73 363 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 BMFQ96LC9 184 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 ZNF641Q96N77 438 aaPredicted RBP18.01■□□□□ 0.47
ERBB2-221ENST00000584888 LENG8Q96PV6 779 aaPredicted RBP18.01■□□□□ 0.47
ERBB2-221ENST00000584888 PSKH2Q96QS6 385 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 TUBGCP5Q96RT8 1024 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 KLF6Q99612 283 aaPredicted RBP18.01■□□□□ 0.47
ERBB2-221ENST00000584888 ZNF670Q9BS34 389 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 SUV39H2Q9H5I1 410 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 CAAP1Q9H8G2 361 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 SP110Q9HB58 689 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 SCUBE2Q9NQ36 999 aa18.01■□□□□ 0.47
ERBB2-221ENST00000584888 TDRD6O60522 2096 aaKnown RBP18■□□□□ 0.47
ERBB2-221ENST00000584888 POM121BA6NF01 834 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 IGLON5A6NGN9 336 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 A6NNZ2 444 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 RAD51BO15315 384 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 PIGNO95427 931 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 KRT7P08729 469 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 SERPINB6P35237 376 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 SSR1P43307 286 aaKnown RBP18■□□□□ 0.47
ERBB2-221ENST00000584888 SUOXP51687 545 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 SLC10A7Q0GE19 358 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 MESDQ14696 234 aa18■□□□□ 0.47
ERBB2-221ENST00000584888 LBRQ14739 615 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms