RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 TMEM8BA6NDV4 472 aa18.19■□□□□ 0.5
SRSF1-208ENST00000584773 TM7SF2O76062 418 aa18.19■□□□□ 0.5
SRSF1-208ENST00000584773 XPAP23025 273 aaPredicted RBP18.19■□□□□ 0.5
SRSF1-208ENST00000584773 ARL4AP40617 200 aa18.19■□□□□ 0.5
SRSF1-208ENST00000584773 SSR1P43307 286 aaKnown RBP18.19■□□□□ 0.5
SRSF1-208ENST00000584773 RABIFP47224 123 aa18.19■□□□□ 0.5
SRSF1-208ENST00000584773 PFN3P60673 137 aa18.19■□□□□ 0.5
SRSF1-208ENST00000584773 IL10RBQ08334 325 aa18.19■□□□□ 0.5
SRSF1-208ENST00000584773 SLC10A7Q0GE19 358 aa18.19■□□□□ 0.5
SRSF1-208ENST00000584773 SKOR2Q2VWA4 1001 aaPredicted RBP18.19■□□□□ 0.5
SRSF1-208ENST00000584773 BOLA3Q53S33 107 aa18.19■□□□□ 0.5
SRSF1-208ENST00000584773 NYAP1Q6ZVC0 841 aa18.19■□□□□ 0.5
SRSF1-208ENST00000584773 TP53I13Q8NBR0 393 aaPredicted RBP18.19■□□□□ 0.5
SRSF1-208ENST00000584773 ZNF564Q8TBZ8 553 aaPredicted RBP18.19■□□□□ 0.5
SRSF1-208ENST00000584773 TCEAL2Q9H3H9 227 aaPredicted RBP18.19■□□□□ 0.5
SRSF1-208ENST00000584773 TSPY26PQ9H489 355 aa18.19■□□□□ 0.5
SRSF1-208ENST00000584773 RALYQ9UKM9 306 aaKnown RBP18.19■□□□□ 0.5
SRSF1-208ENST00000584773 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.19■□□□□ 0.54e-17■■■□□ 14.8
SRSF1-208ENST00000584773 SRRM3A6NNA2 597 aaPredicted RBP18.18■□□□□ 0.5
SRSF1-208ENST00000584773 PEX11BO96011 259 aa18.18■□□□□ 0.5
SRSF1-208ENST00000584773 HNRNPH3P31942 346 aaKnown RBP18.18■□□□□ 0.5
SRSF1-208ENST00000584773 EIF2B5Q13144 721 aaKnown RBP18.18■□□□□ 0.5
SRSF1-208ENST00000584773 LBRQ14739 615 aaKnown RBP18.18■□□□□ 0.5
SRSF1-208ENST00000584773 IRF4Q15306 451 aa18.18■□□□□ 0.5
SRSF1-208ENST00000584773 UGP2Q16851 508 aa18.18■□□□□ 0.5
SRSF1-208ENST00000584773 TMEM52BQ4KMG9 183 aa18.18■□□□□ 0.5
SRSF1-208ENST00000584773 TMCO3Q6UWJ1 677 aa18.18■□□□□ 0.5
SRSF1-208ENST00000584773 RBFAQ8N0V3 343 aa18.18■□□□□ 0.5
SRSF1-208ENST00000584773 PGBD5Q8N414 524 aa18.18■□□□□ 0.5
SRSF1-208ENST00000584773 DENND6BQ8NEG7 585 aa18.18■□□□□ 0.5
SRSF1-208ENST00000584773 ASB12Q8WXK4 309 aa18.18■□□□□ 0.5
SRSF1-208ENST00000584773 PCDHGA1Q9Y5H4 931 aa18.18■□□□□ 0.5
SRSF1-208ENST00000584773 KNTC1P50748 2209 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 RIOK3O14730 519 aaKnown RBP18.17■□□□□ 0.5
SRSF1-208ENST00000584773 C6P13671 934 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 CKMT2P17540 419 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 IL4RP24394 825 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 SCNN1BP51168 640 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 ZNF135P52742 658 aaPredicted RBP18.17■□□□□ 0.5
SRSF1-208ENST00000584773 CDH6P55285 790 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 TAS2R40P59535 323 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 CAMK2BQ13554 666 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 KRT81Q14533 505 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 ASTE1Q2TB18 679 aaPredicted RBP18.17■□□□□ 0.5
SRSF1-208ENST00000584773 CFAP58Q5T655 872 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 SPECC1LQ69YQ0 1117 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 ZSCAN30Q86W11 494 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 PARGQ86W56 976 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 GALNT15Q8N3T1 639 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 ZNF548Q8NEK5 533 aaPredicted RBP18.17■□□□□ 0.5
SRSF1-208ENST00000584773 OR4C6Q8NH72 309 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 TEKT4Q8WW24 435 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 CTTNBP2NLQ9P2B4 639 aa18.17■□□□□ 0.5
SRSF1-208ENST00000584773 LAMA5O15230 3695 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 A8MX80 341 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 MYO1FO00160 1098 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 MAFKO60675 156 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 MAP3K6O95382 1288 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 CSF2P04141 144 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 NME1P15531 152 aaKnown RBP18.16■□□□□ 0.5
SRSF1-208ENST00000584773 SERPINA4P29622 427 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 MMP12P39900 470 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 CSNK1DP48730 415 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 LIG3P49916 1009 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 ARSEP51690 589 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 MAXP61244 160 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 ELP6Q0PNE2 266 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 RALGDSQ12967 914 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 ZNF211Q13398 564 aaPredicted RBP18.16■□□□□ 0.5
SRSF1-208ENST00000584773 WSCD2Q2TBF2 565 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 HES3Q5TGS1 186 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 TMCO4Q5TGY1 634 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 DCP2Q8IU60 420 aaKnown RBP18.16■□□□□ 0.5
SRSF1-208ENST00000584773 VSTM4Q8IW00 320 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 LZTR1Q8N653 840 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 FAM174AQ8TBP5 190 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 LRRN4Q8WUT4 740 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 IFT43Q96FT9 208 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 ZNF641Q96N77 438 aaPredicted RBP18.16■□□□□ 0.5
SRSF1-208ENST00000584773 TUBGCP5Q96RT8 1024 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 DNAJC7Q99615 494 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 CHP1Q99653 195 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 ATP13A3Q9H7F0 1226 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 SEPT3Q9UH03 358 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 ATP8A1Q9Y2Q0 1164 aa18.16■□□□□ 0.5
SRSF1-208ENST00000584773 APC2O95996 2303 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 LY6G6EA0A0G2JKS1 128 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 TRABD2BA6NFA1 517 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 TMEM110-MUSTN1A8MSY1 372 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 K7ESM1 405 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 TRAFD1O14545 582 aaPredicted RBP18.15■□□□□ 0.5
SRSF1-208ENST00000584773 CBFA2T2O43439 604 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 MFSD11O43934 449 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 TPM3P06753 285 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 JUNDP17535 347 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 ADKP55263 362 aaKnown RBP18.15■□□□□ 0.5
SRSF1-208ENST00000584773 HNRNPKP61978 463 aaKnown RBP eCLIP18.15■□□□□ 0.5
SRSF1-208ENST00000584773 DAB2P98082 770 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 BCL2L1Q07817 233 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 C1orf61Q13536 156 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms