RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 GRK6P43250 576 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 TMEM52BQ4KMG9 183 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 RHBDD1Q8TEB9 315 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 FATE1Q969F0 183 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 TSGA13Q96PP4 275 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 NUDCD1Q96RS6 583 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 CDC6Q99741 560 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 BAG1Q99933 345 aaPredicted RBP27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 FZD3Q9NPG1 666 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 SCUBE2Q9NQ36 999 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 PCOLCE2Q9UKZ9 415 aa27.42■■□□□ 1.98
SMARCD2-210ENST00000584400 DNAH14Q0VDD8 3507 aa27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 MUSKO15146 869 aa27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 NEBLO76041 1014 aa27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 RXRGP48443 463 aa27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 SIM1P81133 766 aaPredicted RBP27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 TRIP6Q15654 476 aaKnown RBP27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 ABI3BPQ7Z7G0 1075 aa27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 TXLNBQ8N3L3 684 aa27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 PQLC3Q8N755 202 aa27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 ECHDC3Q96DC8 303 aa27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 AMACRQ9UHK6 382 aa27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 GGT7Q9UJ14 662 aa27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 CA5BQ9Y2D0 317 aa27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 ALG6Q9Y672 507 aa27.41■■□□□ 1.98
SMARCD2-210ENST00000584400 CACNA1EQ15878 2313 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 MATN3O15232 486 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 PSTPIP1O43586 416 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 SOCS5O75159 536 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 ITGAVP06756 1048 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 TNNT1P13805 278 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 RABIFP47224 123 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 LRRC73Q5JTD7 316 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 KYAT3Q6YP21 454 aaKnown RBP27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 GCNT7Q6ZNI0 430 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 TEX26Q8N6G2 289 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 CAMK1GQ96NX5 476 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 PCDH12Q9NPG4 1184 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 ATP8A1Q9Y2Q0 1164 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 PLXNA2O75051 1894 aa27.4■■□□□ 1.98
SMARCD2-210ENST00000584400 CFAP69A5D8W1 941 aa27.39■■□□□ 1.98
SMARCD2-210ENST00000584400 RIOK3O14730 519 aaKnown RBP27.39■■□□□ 1.98
SMARCD2-210ENST00000584400 APOL1O14791 398 aa27.39■■□□□ 1.98
SMARCD2-210ENST00000584400 SPINT1O43278 529 aa27.39■■□□□ 1.98
SMARCD2-210ENST00000584400 MMP20O60882 483 aa27.39■■□□□ 1.98
SMARCD2-210ENST00000584400 CR2P20023 1033 aa27.39■■□□□ 1.98
SMARCD2-210ENST00000584400 CES1P23141 567 aa27.39■■□□□ 1.98
SMARCD2-210ENST00000584400 FGL2Q14314 439 aa27.39■■□□□ 1.98
SMARCD2-210ENST00000584400 PRAMEF14Q5SWL7 426 aa27.39■■□□□ 1.98
SMARCD2-210ENST00000584400 C11orf63Q6NUN7 778 aa27.39■■□□□ 1.98
SMARCD2-210ENST00000584400 SPATS2Q86XZ4 545 aaKnown RBP27.39■■□□□ 1.98
SMARCD2-210ENST00000584400 HDAC11Q96DB2 347 aa27.39■■□□□ 1.98
SMARCD2-210ENST00000584400 POLR1EQ9GZS1 481 aaKnown RBP27.39■■□□□ 1.98
SMARCD2-210ENST00000584400 CBFA2T3O75081 653 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 TRIM16O95361 564 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 CLDN2P57739 230 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 IL9RQ01113 521 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 ITKQ08881 620 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 SLC9A4Q6AI14 798 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 Q6ZSR6 202 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 PTAR1Q7Z6K3 402 aaPredicted RBP27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 CCNYQ8ND76 341 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 OR13H1Q8NG92 308 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 SPOCK2Q92563 424 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 MAML1Q92585 1016 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 IFT43Q96FT9 208 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 WRAP53Q9BUR4 548 aaKnown RBP27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 NT5MQ9NPB1 228 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 DTLQ9NZJ0 730 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 HYOU1Q9Y4L1 999 aa27.38■■□□□ 1.97
SMARCD2-210ENST00000584400 SPAARA0A1B0GVQ0 90 aa27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 C3orf70A6NLC5 250 aaPredicted RBP27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 TRAFD1O14545 582 aaPredicted RBP27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 TOR1BO14657 336 aa27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 LAMA1P25391 3075 aa27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 EPHA8P29322 1005 aaPredicted RBP27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 NAP1L1P55209 391 aaKnown RBP27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 FAM193AP78312 1265 aa27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 GBE1Q04446 702 aa27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 TFDP2Q14188 446 aa27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 BZW1Q7L1Q6 419 aaKnown RBP27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 GLRX5Q86SX6 157 aa27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 RFX6Q8HWS3 928 aa27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 CCDC13Q8IYE1 715 aa27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 PGBD5Q8N414 524 aa27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 SAP25Q8TEE9 199 aa27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 RNF25Q96BH1 459 aaPredicted RBP27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 BMFQ96LC9 184 aa27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 KLF6Q99612 283 aaPredicted RBP27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 NOD2Q9HC29 1040 aa27.37■■□□□ 1.97
SMARCD2-210ENST00000584400 CACNA1AO00555 2505 aa27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 BTNL10A8MVZ5 291 aa27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 MAP3K6O95382 1288 aa27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 CCNB1P14635 433 aa27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 ITIH2P19823 946 aa27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 PMLP29590 882 aa27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 MAXP61244 160 aa27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 DAAM2Q86T65 1068 aa27.36■■□□□ 1.97
SMARCD2-210ENST00000584400 NDUFAF2Q8N183 169 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms