RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 SERINC3Q13530 473 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 DRAP1Q14919 205 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 EDRF1Q3B7T1 1238 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 TBC1D25Q3MII6 688 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 TTC31Q49AM3 519 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 DCAF17Q5H9S7 520 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 PIP5KL1Q5T9C9 394 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 TMEM270Q6UE05 265 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 ADAT2Q7Z6V5 191 aaKnown RBP8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 C14orf80Q86SX3 495 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 LGI2Q8N0V4 545 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 SIX6OS1Q8N1H7 587 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 TMEM145Q8NBT3 493 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 HJURPQ8NCD3 748 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 OR14C36Q8NHC7 312 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 GANCQ8TET4 914 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 RNF139Q8WU17 664 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 FUBP1Q96AE4 644 aaKnown RBP8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 ARRDC3Q96B67 414 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 PRR11Q96HE9 360 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 IPO9Q96P70 1041 aaKnown RBP8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 PSMB7Q99436 277 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 MIS12Q9H081 205 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 ASCL3Q9NQ33 180 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 ABCC13Q9NSE7 274 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 AJAP1Q9UKB5 411 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 FZD4Q9ULV1 537 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 SNX10Q9Y5X0 201 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 AHCTF1Q8WYP5 2266 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 DOPEY2Q9Y3R5 2298 aa8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 ARHGEF17Q96PE2 2063 aaPredicted RBP8.09□□□□□ -1.11
PPP4R1-225ENST00000583438 EDDM13A0A1B0GTR0 161 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 FAM170AA1A519 330 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 KCNU1A8MYU2 1149 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 SHOXO15266 292 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 RAD51BO15315 384 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 PLRG1O43660 514 aaKnown RBP8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 NEBLO76041 1014 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 ATP5BP06576 529 aaKnown RBP8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 ITGAVP06756 1048 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 SETSIPP0DME0 302 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 PDGFRAP16234 1089 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 GOT1P17174 413 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 ABCB4P21439 1286 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 TACR2P21452 398 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 GLDCP23378 1020 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 ACP1P24666 158 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 FMO5P49326 533 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 PDX1P52945 283 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 C21orf59P57076 290 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 CLDN2P57739 230 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 SRSF6Q13247 344 aaKnown RBP8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 AUHQ13825 339 aaKnown RBP8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 LY6DQ14210 128 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 BBS9Q3SYG4 887 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 ZNF542PQ5EBM4 170 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 MRM1Q6IN84 353 aaKnown RBP8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 NAPEPLDQ6IQ20 393 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 GCNT7Q6ZNI0 430 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 RRAGAQ7L523 313 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 ZNF683Q8IZ20 524 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 WDTC1Q8N5D0 677 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 CHST14Q8NCH0 376 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 AZIN2Q96A70 460 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 FAXDC2Q96IV6 333 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 SCAND2PQ9GZW5 306 aaPredicted RBP8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 GDF3Q9NR23 364 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 SUN2Q9UH99 717 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 RNF112Q9ULX5 631 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 ST14Q9Y5Y6 855 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 ACTL7AQ9Y615 435 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 SDK2Q58EX2 2172 aa8.08□□□□□ -1.12
PPP4R1-225ENST00000583438 BECN2A8MW95 431 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 E5RJQ4 531 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 E9PAM4 449 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 FFAR2O15552 330 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 SMAD6O43541 496 aaKnown RBP8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 SNAP91O60641 907 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 ZNF821O75541 412 aaPredicted RBP8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 CNTN5O94779 1100 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 ZNF202O95125 648 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 MED26O95402 600 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 IL1BP01584 269 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 ASLP04424 464 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 SRPRAP08240 638 aaKnown RBP8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 CKMT2P17540 419 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 C5AR1P21730 350 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 DGKAP23743 735 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 ZNF445P59923 1031 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 CXADRP78310 365 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 ECT2LQ008S8 904 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 CDH18Q13634 790 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 ELAVL3Q14576 367 aaKnown RBP8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 CNGA2Q16280 664 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 MSMPQ1L6U9 139 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 ZNF284Q2VY69 593 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 CDKAL1Q5VV42 579 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 TCERG1LQ5VWI1 586 aa8.07□□□□□ -1.12
PPP4R1-225ENST00000583438 NUGGCQ68CJ6 796 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms