RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 FUCA2Q9BTY2 467 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 OSBPL1AQ9BXW6 950 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 ZYG11BQ9C0D3 744 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 ADNPQ9H2P0 1102 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 TMEM51Q9NW97 253 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 AKAP7Q9P0M2 348 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-215ENST00000583328 PCDHGC3Q9UN70 934 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 CTNND2Q9UQB3 1225 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 RNF215Q9Y6U7 377 aa12.45□□□□□ -0.42
TOP3A-215ENST00000583328 BECN2A8MW95 431 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 C9orf172C9J069 976 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 GSRP00390 522 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 TNFP01375 233 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 ITIH2P19823 946 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 CR2P20023 1033 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 ACVRL1P37023 503 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 SRP54P61011 504 aaKnown RBP12.44□□□□□ -0.42
TOP3A-215ENST00000583328 PTK2Q05397 1052 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 LRRC14Q15048 493 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 IRF4Q15306 451 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 IGFBP7Q16270 282 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 DPCR1Q3MIW9 517 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 CT47A1Q5JQC4 288 aaPredicted RBP12.44□□□□□ -0.42
TOP3A-215ENST00000583328 PHF19Q5T6S3 580 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 TTI2Q6NXR4 508 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 BORAQ6PGQ7 559 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 GDPD4Q6W3E5 623 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 ZDHHC17Q8IUH5 632 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 GPR156Q8NFN8 814 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 OR2AP1Q8NGE2 309 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 PGAP3Q96FM1 320 aaPredicted RBP12.44□□□□□ -0.42
TOP3A-215ENST00000583328 HAPLN3Q96S86 360 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 CRACR2AQ9BSW2 395 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 WRAP53Q9BUR4 548 aaKnown RBP12.44□□□□□ -0.42
TOP3A-215ENST00000583328 EPN3Q9H201 632 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 ANO10Q9NW15 660 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 ZNF212Q9UDV6 495 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 KLQ9UEF7 1012 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 APPL1Q9UKG1 709 aa12.44□□□□□ -0.42
TOP3A-215ENST00000583328 TIMP2P16035 220 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 PNLIPP16233 465 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 GLB1P16278 677 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 XPAP23025 273 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-215ENST00000583328 ETFBP38117 255 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 ATP1A2P50993 1020 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 GEMIN4P57678 1058 aaKnown RBP12.43□□□□□ -0.42
TOP3A-215ENST00000583328 RAD51Q06609 339 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 KCNAB2Q13303 367 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 ARHGEF7Q14155 803 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 NFATC4Q14934 902 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 STX1AQ16623 288 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 WSCD2Q2TBF2 565 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 SLC25A52Q3SY17 297 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 LEKR1Q6ZMV7 388 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 TAF8Q7Z7C8 310 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 ATL2Q8NHH9 583 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 ARHGEF2Q92974 986 aaKnown RBP12.43□□□□□ -0.42
TOP3A-215ENST00000583328 NT5C3BQ969T7 300 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 APOOQ9BUR5 198 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 SLC12A9Q9BXP2 914 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 LRIT1Q9P2V4 623 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 PPARGC1AQ9UBK2 798 aaKnown RBP12.43□□□□□ -0.42
TOP3A-215ENST00000583328 RWDD2AQ9UIY3 292 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 HPCAL4Q9UM19 191 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 COQ6Q9Y2Z9 468 aa12.43□□□□□ -0.42
TOP3A-215ENST00000583328 UBR5O95071 2799 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-215ENST00000583328 CXorf51AA0A1B0GTR3 108 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 STMND1H3BQB6 276 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 ERCC5P28715 1186 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-215ENST00000583328 STX17P56962 302 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 FOXK1P85037 733 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 CERCAMQ5T4B2 595 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 ARTNQ5T4W7 220 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 ATXN7L2Q5T6C5 722 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-215ENST00000583328 OGFOD3Q6PK18 319 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 SPRED1Q7Z699 444 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 FAM46DQ8NEK8 389 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 B3GNT4Q9C0J1 378 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 PDCL3Q9H2J4 239 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 SEMA6CQ9H3T2 930 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 PLCB1Q9NQ66 1216 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 DNAI1Q9UI46 699 aa12.42□□□□□ -0.42
TOP3A-215ENST00000583328 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-215ENST00000583328 BUB1O43683 1085 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 PCCBP05166 539 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 CCL4P13236 92 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 SLC9A1P19634 815 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 CASRP41180 1078 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 CCR10P46092 362 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 POLE2P56282 527 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 TYRO3Q06418 890 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 ELP6Q0PNE2 266 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 SERINC3Q13530 473 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 INPP5AQ14642 412 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 C16orf72Q14CZ0 275 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 NCAPHQ15003 741 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 MAP9Q49MG5 647 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 TMEM52BQ4KMG9 183 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 C4orf17Q53FE4 359 aa12.41□□□□□ -0.42
TOP3A-215ENST00000583328 FAM102AQ5T9C2 384 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms