RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-213	ENST00000581523	CATSPER3	Q86XQ3	398 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	GATAD2A	Q86YP4	633 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	CCDC28A	Q8IWP9	274 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	CCDC105	Q8IYK2	499 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	ADSSL1	Q8N142	457 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	D2HGDH	Q8N465	521 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	PSD4	Q8NDX1	1056 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	CNNM3	Q8NE01	707 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	MCPH1	Q8NEM0	835 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	ERMN	Q8TAM6	284 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	KCNG4	Q8TDN1	519 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	RSPH1	Q8WYR4	309 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	STAM	Q92783	540 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	FGF14	Q92915	247 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	USP13	Q92995	863 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	MIEF2	Q96C03	454 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	C8orf76	Q96K31	380 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	MTMR9	Q96QG7	549 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	OR14A2	Q96R54	314 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	MED15	Q96RN5	788 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	NEU1	Q99519	415 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	PRPF18	Q99633	342 aa	Known RBP	4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	HSD17B14	Q9BPX1	270 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	ADPGK	Q9BRR6	497 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	FAM167B	Q9BTA0	163 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	RPP25	Q9BUL9	199 aa	Known RBP	4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	TTYH3	Q9C0H2	523 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	WDR6	Q9NNW5	1121 aa	Known RBP	4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	UBN1	Q9NPG3	1134 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	ARHGEF3	Q9NR81	526 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	ANKEF1	Q9NU02	776 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	DDX19A	Q9NUU7	478 aa	Known RBP	4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	CTTNBP2NL	Q9P2B4	639 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	ANKFY1	Q9P2R3	1169 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	FBXW11	Q9UKB1	542 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523		R4GN57	208 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	MYO10	Q9HD67	2058 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	PHLPP2	Q6ZVD8	1323 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	DCHS1	Q96JQ0	3298 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	ADAMTS20	P59510	1910 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	DMXL1	Q9Y485	3027 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	MYH11	P35749	1972 aa		4.64	□□□□□ -1.67
MSI2-213	ENST00000581523	DOCK6	Q96HP0	2047 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	OR2W5	A6NFC9	320 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523		E9PMD0	336 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	EIF3F	O00303	357 aa	Predicted RBP	4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	ASAP2	O43150	1006 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	ASNA1	O43681	348 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	COQ9	O75208	318 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	FAM155B	O75949	473 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	B3GAT3	O94766	335 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	LYPLA2	O95372	231 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	PYGL	P06737	847 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	CEBPB	P17676	345 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	CD72	P21854	359 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	MST1	P26927	711 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	CDC25A	P30304	524 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	SLC5A2	P31639	672 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	NBL1	P41271	181 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	MATR3	P43243	847 aa	Known RBP eCLIP	4.63	□□□□□ -1.67	2e-7	■■■■■ 27.4
MSI2-213	ENST00000581523	NAMPT	P43490	491 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	BRCC3	P46736	316 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	DGKE	P52429	567 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	ZNF134	P52741	427 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	PEX3	P56589	373 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	LOXL3	P58215	753 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	LILRA4	P59901	499 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	NHLH2	Q02577	135 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	SPAG1	Q07617	926 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	EFR3A	Q14156	821 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	INTS11	Q5TA45	600 aa	Known RBP	4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	ATF7IP2	Q5U623	682 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	MANEAL	Q5VSG8	457 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	HAUS3	Q68CZ6	603 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	OGFOD2	Q6N063	350 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	TCTN3	Q6NUS6	607 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	MZT2A	Q6P582	158 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	PARM1	Q6UWI2	310 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	LAYN	Q6UX15	382 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	KCTD20	Q7Z5Y7	419 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	MOGAT3	Q86VF5	341 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	KIAA2013	Q8IYS2	634 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	FAM184A	Q8NB25	1140 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	CMAS	Q8NFW8	434 aa	Predicted RBP	4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	ITFG1	Q8TB96	612 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	ZNF483	Q8TF39	744 aa	Predicted RBP	4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	RSC1A1	Q92681	617 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	MPP4	Q96JB8	637 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	IFT74	Q96LB3	600 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	PPM1M	Q96MI6	270 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	PLIN2	Q99541	437 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	TTPAL	Q9BTX7	342 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	SLC46A2	Q9BY10	475 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	NFKBIZ	Q9BYH8	718 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	TRIM5	Q9C035	493 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	NT5C3A	Q9H0P0	336 aa		4.63	□□□□□ -1.67
MSI2-213	ENST00000581523	C2orf40	Q9H1Z8	148 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms