RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 LRRC40Q9H9A6 602 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 ARNT2Q9HBZ2 717 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 ZDHHC4Q9NPG8 344 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 C11orf16Q9NQ32 467 aa10.5□□□□□ -0.73
CCDC47-203ENST00000580986 USP36Q9P275 1121 aaKnown RBP10.5□□□□□ -0.73
CCDC47-203ENST00000580986 ATG2BQ96BY7 2078 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 LOC285095A0A1B0GVY8 99 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 TCRBV21S2A2A0A5A6 115 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 K7ESF4 209 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 AP1G1O43747 822 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 SUN1O94901 812 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 PGLSO95336 258 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 METTL18O95568 372 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 IL1BP01584 269 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 DNTTP04053 509 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 TDGF1P13385 188 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 NDUFV2P19404 249 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 HLA-DPA1P20036 260 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 TPSB2P20231 275 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 PSMB4P28070 264 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 AVPR2P30518 371 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 CD86P42081 329 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 GRIA4P48058 902 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 NRLP54845 237 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 DRG2P55039 364 aaKnown RBP10.49□□□□□ -0.73
CCDC47-203ENST00000580986 ITKQ08881 620 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 IHHQ14623 411 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 PPP1R7Q15435 360 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 TPSAB1Q15661 275 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 ZNF528Q3MIS6 628 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 C6orf132Q5T0Z8 1188 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 ARMC12Q5T9G4 340 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 NAPEPLDQ6IQ20 393 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 KDELC1Q6UW63 502 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 PCGF5Q86SE9 256 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 LINC00523Q86TU6 105 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 MMAAQ8IVH4 418 aaKnown RBP10.49□□□□□ -0.73
CCDC47-203ENST00000580986 KLHL7Q8IXQ5 586 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 DTWD2Q8NBA8 298 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 GLIS1Q8NBF1 620 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 MDGA1Q8NFP4 955 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 SEC14L1Q92503 715 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 SIPA1Q96FS4 1042 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 OXNAD1Q96HP4 312 aaPredicted RBP10.49□□□□□ -0.73
CCDC47-203ENST00000580986 LYSMD1Q96S90 227 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 KRT12Q99456 494 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 C19orf43Q9BQ61 176 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 ADGRE3Q9BY15 652 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 CEP41Q9BYV8 373 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 FAM129AQ9BZQ8 928 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 RAB17Q9H0T7 212 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 PABPC3Q9H361 631 aaKnown RBP10.49□□□□□ -0.73
CCDC47-203ENST00000580986 MTG2Q9H4K7 406 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 DYRK4Q9NR20 520 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 RAB6BQ9NRW1 208 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 SARDHQ9UL12 918 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 TPX2Q9ULW0 747 aaKnown RBP10.49□□□□□ -0.73
CCDC47-203ENST00000580986 PHTF1Q9UMS5 762 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 TTLL3Q9Y4R7 772 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 RAI2Q9Y5P3 530 aa10.49□□□□□ -0.73
CCDC47-203ENST00000580986 C10orf142B7Z368 130 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 KPNA3O00505 521 aaPredicted RBP10.48□□□□□ -0.73
CCDC47-203ENST00000580986 LAMTOR5O43504 91 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 NDST3O95803 873 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 MT-CYBP00156 380 aaPredicted RBP10.48□□□□□ -0.73
CCDC47-203ENST00000580986 PRLP01236 227 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 FGF1P05230 155 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 UGT2B4P06133 528 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 ACADMP11310 421 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 IVDP26440 423 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 SLC8A1P32418 973 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 ADRA1AP35348 466 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 DRD3P35462 400 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 TNNT3P45378 269 aaPredicted RBP10.48□□□□□ -0.73
CCDC47-203ENST00000580986 NEK3P51956 506 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 WNT3AP56704 352 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 CDK18Q07002 472 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 C2orf54Q08AI8 447 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 TRAF2Q12933 501 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 CBLBQ13191 982 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 UGP2Q16851 508 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 C8orf74Q6P047 294 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 NEK5Q6P3R8 708 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 RANBP10Q6VN20 620 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 ERN2Q76MJ5 926 aaKnown RBP10.48□□□□□ -0.73
CCDC47-203ENST00000580986 HOOK3Q86VS8 718 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 CAMK1DQ8IU85 385 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 NDUFAF2Q8N183 169 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 RYBPQ8N488 228 aaPredicted RBP10.48□□□□□ -0.73
CCDC47-203ENST00000580986 BBOF1Q8ND07 529 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 OR6K2Q8NGY2 324 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 SPATA22Q8NHS9 363 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 GRIN3AQ8TCU5 1115 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 NELL1Q92832 810 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 MRGPRX2Q96LB1 330 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 NSMCE3Q96MG7 304 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 KLHL32Q96NJ5 620 aa10.48□□□□□ -0.73
CCDC47-203ENST00000580986 MCCC1Q96RQ3 725 aaPredicted RBP10.48□□□□□ -0.73
CCDC47-203ENST00000580986 RBM15Q96T37 977 aaKnown RBP eCLIP10.48□□□□□ -0.73
CCDC47-203ENST00000580986 ERP44Q9BS26 406 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms