RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ERFP50548 548 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 OXCT1P55809 520 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 IL10RBQ08334 325 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 LBRQ14739 615 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SETDB1Q15047 1291 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ANO4Q32M45 955 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TAF1BQ53T94 588 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FGF13Q92913 245 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 VAT1Q99536 393 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MAGEH1Q9H213 219 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ARHGEF3Q9NR81 526 aa12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FBXO6Q9NRD1 293 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-217ENST00000580287 COL6A3P12111 3177 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ILVBLA1L0T0 632 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 DIAPH2O60879 1101 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CD160O95971 181 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 C1QAP02745 245 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 BGNP21810 368 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 GMPRP36959 345 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 IRX4P78413 519 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ARF5P84085 180 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MTA1Q13330 715 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FAM78AQ5JUQ0 283 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 LY6G5CQ5SRR4 150 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ITPRIPL1Q6GPH6 555 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ASTLQ6HA08 431 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 NPAS3Q8IXF0 933 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SLC25A41Q8N5S1 370 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 GBP7Q8N8V2 638 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 HJURPQ8NCD3 748 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 C10orf82Q8WW14 230 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ATP2A3Q93084 1043 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 RPL10LQ96L21 214 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 DDX50Q9BQ39 737 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SYBUQ9NX95 663 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 DPP7Q9UHL4 492 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 BMP8BP34820 402 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZNF33AQ06730 810 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZNF77Q15935 545 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ACBD5Q5T8D3 534 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 RNF43Q68DV7 783 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 LRRC8BQ6P9F7 803 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CHST9Q7L1S5 443 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 RTL10Q7L3V2 364 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TTC7BQ86TV6 843 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FAM217AQ8IXS0 508 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ADGRG2Q8IZP9 1017 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 NDUFAF2Q8N183 169 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ASIC4Q96FT7 647 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZNF778Q96MU6 729 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SEMA3CQ99985 751 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FICDQ9BVA6 458 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SFXN1Q9H9B4 322 aa12.81□□□□□ -0.36
CDK5RAP3-217ENST00000580287 E2F8A0AVK6 867 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZNF197O14709 1029 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 KDELR3O43731 214 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 MMP2P08253 660 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TROVE2P10155 538 aaKnown RBP eCLIP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 GM2AP17900 193 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ALDH3A1P30838 453 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 IRX1P78414 480 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CDK16Q00536 496 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SLC18A2Q05940 514 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 LMAN2Q12907 356 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 RGS9BPQ6ZS82 235 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SETD3Q86TU7 594 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 LRRC49Q8IUZ0 686 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ARMC2Q8NEN0 867 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TTC8Q8TAM2 541 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SPDL1Q96EA4 605 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ALG14Q96F25 216 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SMIM14Q96QK8 99 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FCRL5Q96RD9 977 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TSSK1BQ9BXA7 367 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 BBS2Q9BXC9 721 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ACE2Q9BYF1 805 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 LMAN2LQ9H0V9 348 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 VPS11Q9H270 941 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ABCB8Q9NUT2 735 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 NKX1-2Q9UD57 310 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 INTS6Q9UL03 887 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FCF1Q9Y324 198 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 OR51B4Q9Y5P0 310 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 USH1CQ9Y6N9 552 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ATG2AQ2TAZ0 1938 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TYW5A2RUC4 315 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 OTOL1A6NHN0 477 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FAM159BA6NKW6 160 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 H0Y3Z8 333 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SMAD6O43541 496 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CACNG3O60359 315 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 GSTA2P09210 222 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 FSHRP23945 695 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CCND1P24385 295 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 HLA-FP30511 346 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CTSOP43234 321 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SCNN1BP51168 640 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 NEK3P51956 506 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZNF235Q14590 738 aa12.8□□□□□ -0.36
CDK5RAP3-217ENST00000580287 GRIN2CQ14957 1233 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms