RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 GAS2L3Q86XJ1 694 aa11□□□□□ -0.65
NDEL1-208ENST00000580237 GATAD2AQ86YP4 633 aa11□□□□□ -0.65
NDEL1-208ENST00000580237 LRRC49Q8IUZ0 686 aa11□□□□□ -0.65
NDEL1-208ENST00000580237 RHOT1Q8IXI2 618 aa11□□□□□ -0.65
NDEL1-208ENST00000580237 DENND6BQ8NEG7 585 aa11□□□□□ -0.65
NDEL1-208ENST00000580237 OR13H1Q8NG92 308 aa11□□□□□ -0.65
NDEL1-208ENST00000580237 PCDH19Q8TAB3 1148 aa11□□□□□ -0.65
NDEL1-208ENST00000580237 FAM174AQ8TBP5 190 aa11□□□□□ -0.65
NDEL1-208ENST00000580237 FAM71BQ8TC56 605 aa11□□□□□ -0.65
NDEL1-208ENST00000580237 CDC6Q99741 560 aa11□□□□□ -0.65
NDEL1-208ENST00000580237 MAK16Q9BXY0 300 aaKnown RBP11□□□□□ -0.65
NDEL1-208ENST00000580237 PCDH12Q9NPG4 1184 aa11□□□□□ -0.65
NDEL1-208ENST00000580237 DDX56Q9NY93 547 aaKnown RBP11□□□□□ -0.65
NDEL1-208ENST00000580237 PCOLCE2Q9UKZ9 415 aa11□□□□□ -0.65
NDEL1-208ENST00000580237 APOBEC2Q9Y235 224 aaKnown RBP11□□□□□ -0.65
NDEL1-208ENST00000580237 ATP8A1Q9Y2Q0 1164 aa11□□□□□ -0.65
NDEL1-208ENST00000580237 TSPAN11A1L157 253 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 APOL1O14791 398 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 AREL1O15033 823 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 MUSKO15146 869 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 SPINT1O43278 529 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 LZTS3O60299 673 aaPredicted RBP10.99□□□□□ -0.65
NDEL1-208ENST00000580237 MMP20O60882 483 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 SDC3O75056 442 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 CPP00450 1065 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 PRKCGP05129 697 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 TIMP2P16035 220 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 COMTP21964 271 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 KDELR1P24390 212 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 PMLP29590 882 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 RABIFP47224 123 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 ARSEP51690 589 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 THOP1P52888 689 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 NAP1L1P55209 391 aaKnown RBP10.99□□□□□ -0.65
NDEL1-208ENST00000580237 MAXP61244 160 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 POLR2LP62875 67 aaKnown RBP10.99□□□□□ -0.65
NDEL1-208ENST00000580237 NSUN2Q08J23 767 aaKnown RBP eCLIP10.99□□□□□ -0.65
NDEL1-208ENST00000580237 GALNT2Q10471 571 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 FGL2Q14314 439 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 PAFAH1B3Q15102 231 aaKnown RBP10.99□□□□□ -0.65
NDEL1-208ENST00000580237 IFI16Q16666 785 aaKnown RBP10.99□□□□□ -0.65
NDEL1-208ENST00000580237 Q6ZSR6 202 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 KIAA1328Q86T90 577 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 SPATS2Q86XZ4 545 aaKnown RBP10.99□□□□□ -0.65
NDEL1-208ENST00000580237 RFX6Q8HWS3 928 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 TMTC1Q8IUR5 882 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.99□□□□□ -0.65
NDEL1-208ENST00000580237 SPC24Q8NBT2 197 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 CCNYQ8ND76 341 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 HCAR2Q8TDS4 363 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 RAPGEF5Q92565 580 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 MGME1Q9BQP7 344 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 POLR1EQ9GZS1 481 aaKnown RBP10.99□□□□□ -0.65
NDEL1-208ENST00000580237 ERVMER34-1Q9H9K5 563 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 NT5MQ9NPB1 228 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 BTBD3Q9Y2F9 522 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 HYOU1Q9Y4L1 999 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 PCDHA13Q9Y5I0 950 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 HEY1Q9Y5J3 304 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 TPRP12270 2363 aaKnown RBP10.99□□□□□ -0.65
NDEL1-208ENST00000580237 PTPRBP23467 1997 aa10.99□□□□□ -0.65
NDEL1-208ENST00000580237 ARID1BQ8NFD5 2236 aaPredicted RBP10.99□□□□□ -0.65
NDEL1-208ENST00000580237 LRP4O75096 1905 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 TTC24A2A3L6 582 aaPredicted RBP10.98□□□□□ -0.65
NDEL1-208ENST00000580237 H3BM21 787 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 RAD51BO15315 384 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 PSTPIP1O43586 416 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 BUB1BO60566 1050 aaPredicted RBP10.98□□□□□ -0.65
NDEL1-208ENST00000580237 SOCS5O75159 536 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 NDUFA10O95299 355 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 ELFN1P0C7U0 828 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 FTH1P19P0C7X4 201 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 C6P13671 934 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 ITIH2P19823 946 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 CA4P22748 312 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 IL4RP24394 825 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 MMP12P39900 470 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 DYNLT1P63172 113 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 SEMG2Q02383 582 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 GBE1Q04446 702 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 PDE1CQ14123 709 aaPredicted RBP10.98□□□□□ -0.65
NDEL1-208ENST00000580237 LRRC38Q5VT99 294 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 ABI3BPQ7Z7G0 1075 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 DAAM2Q86T65 1068 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 PARGQ86W56 976 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 CCDC50Q8IVM0 306 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 RNF25Q96BH1 459 aaPredicted RBP10.98□□□□□ -0.65
NDEL1-208ENST00000580237 FAF2Q96CS3 445 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 RNF157Q96PX1 679 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 NUDCD1Q96RS6 583 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 C1QTNF2Q9BXJ5 285 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 GOLPH3Q9H4A6 298 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 DNAJC28Q9NX36 388 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 COQ6Q9Y2Z9 468 aa10.98□□□□□ -0.65
NDEL1-208ENST00000580237 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.98□□□□□ -0.65
NDEL1-208ENST00000580237 DNAH14Q0VDD8 3507 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 A0A1W2PQ67 120 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 POM121BA6NF01 834 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 ZNF487B1APH4 448 aa10.97□□□□□ -0.65
NDEL1-208ENST00000580237 RIOK3O14730 519 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms