RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 MRPL1Q9BYD6 325 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TPSD1Q9BZJ3 242 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 DDX47Q9H0S4 455 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TRABDQ9H4I3 376 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ZDHHC7Q9NXF8 308 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 INTUQ9ULD6 942 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MAFFQ9ULX9 164 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 NOVA2Q9UNW9 492 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ADGRG1Q9Y653 693 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF521Q96K83 1311 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ITSN1Q15811 1721 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TRPM3Q9HCF6 1732 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 A0A0J9YVX5 310 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM234BA2RU67 622 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 OR5K4A6NMS3 321 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 KCNK1O00180 336 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CLDN5O00501 218 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ATMINO43313 823 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 DUX1O43812 170 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 GPR37L1O60883 481 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 DAB1O75553 588 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 LYPLA2O95372 231 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 GJB5O95377 273 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 FGF1P05230 155 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 GALTP07902 379 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MMEP08473 750 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 NFKB1P19838 968 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ELK3P41970 407 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SKIV2L2P42285 1042 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CXCR3P49682 368 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SERPINB8P50452 374 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ARFIP2P53365 341 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PMS2P54278 862 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 RAD23AP54725 363 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CASP7P55210 303 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 GNGT1P63211 74 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 KCNJ2P63252 427 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ARHGAP1Q07960 439 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 KCNMA1Q12791 1236 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PWP1Q13610 501 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TRIP10Q15642 601 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CARTPTQ16568 116 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 GALNTL6Q49A17 601 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 FNBP1LQ5T0N5 605 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ARHGAP40Q5TG30 622 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TXNDC8Q6A555 127 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MSANTD2Q6P1R3 559 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 LRRC74BQ6ZQY2 392 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 C3orf62Q6ZUJ4 267 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TRIM69Q86WT6 500 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TMPRSS6Q8IU80 811 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 FMR1NBQ8N0W7 255 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TEX9Q8N6V9 391 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ICA1LQ8NDH6 482 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 OR56A4Q8NGH8 313 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TPCN2Q8NHX9 752 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 KCNJ9Q92806 393 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 EDAQ92838 391 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 RAD51AP1Q96B01 352 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ART5Q96L15 291 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 GAL3ST4Q96RP7 486 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 EBNA1BP2Q99848 306 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 WWP1Q9H0M0 922 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 EPS8L2Q9H6S3 715 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ANKHQ9HCJ1 492 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ARHGEF3Q9NR81 526 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 KCNK4Q9NYG8 393 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MTRRQ9UBK8 725 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 B4GALT7Q9UBV7 327 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 RAPGEFL1Q9UHV5 662 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 POU2F3Q9UKI9 436 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CDYLQ9Y232 598 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 LZTS1Q9Y250 596 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PRKAB1Q9Y478 270 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PCDHGC5Q9Y5F6 944 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PKD1L3Q7Z443 1732 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TCRBV5S4A2TA0A5A2 114 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SHISA7A6NL88 538 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ANKRD63C9JTQ0 380 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ACOT7O00154 380 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 BTN3A1O00481 513 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MDM4O15151 490 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SPAG7O75391 227 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PAGE1O75459 146 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PROSCO94903 275 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 KAT7O95251 611 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 F2P00734 622 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PDHA1P08559 390 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 RHOQP17081 205 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ATP5A1P25705 553 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ITGA3P26006 1051 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CDC25BP30305 580 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 HTR7P34969 479 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 NUDT1P36639 197 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SCNN1AP37088 669 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 IFNGR2P38484 337 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MAPKAPK2P49137 400 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 GTF2BQ00403 316 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 OTUD4Q01804 1114 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms