RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 HOOK3Q86VS8 718 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 C12orf40Q86WS4 652 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 LRRC49Q8IUZ0 686 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 CCDC117Q8IWD4 279 aaPredicted RBP10.2□□□□□ -0.78
CRLF3-202ENST00000577725 AGGF1Q8N302 714 aaeCLIP10.2□□□□□ -0.78
CRLF3-202ENST00000577725 NSMCE1Q8WV22 266 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 OSCP1Q8WVF1 389 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 EXOC4Q96A65 974 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 ALG14Q96F25 216 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 LMLNQ96KR4 655 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 C9orf72Q96LT7 481 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 RBM15Q96T37 977 aaKnown RBP eCLIP10.2□□□□□ -0.78
CRLF3-202ENST00000577725 WDR83Q9BRX9 315 aaKnown RBP10.2□□□□□ -0.78
CRLF3-202ENST00000577725 FEM1AQ9BSK4 669 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 FUT8Q9BYC5 575 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 FAM129AQ9BZQ8 928 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 EPB41L4BQ9H329 900 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 CDC42EP4Q9H3Q1 356 aaKnown RBP10.2□□□□□ -0.78
CRLF3-202ENST00000577725 EBF3Q9H4W6 596 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 SLC32A1Q9H598 525 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 RETREG1Q9H6L5 497 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 GDE1Q9NZC3 331 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 NINJ2Q9NZG7 142 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 VPS51Q9UID3 782 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 INTS6Q9UL03 887 aaKnown RBP10.2□□□□□ -0.78
CRLF3-202ENST00000577725 HPCAL4Q9UM19 191 aa10.2□□□□□ -0.78
CRLF3-202ENST00000577725 K7ERQ8 282 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 SLC9A3R1O14745 358 aaPredicted RBP10.19□□□□□ -0.78
CRLF3-202ENST00000577725 ATXN7O15265 892 aaPredicted RBP10.19□□□□□ -0.78
CRLF3-202ENST00000577725 PMPCBO75439 489 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 ZNF189O75820 626 aaPredicted RBP10.19□□□□□ -0.78
CRLF3-202ENST00000577725 CD160O95971 181 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 MT-CO1P00395 513 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 NTRK1P04629 796 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 CHRNB1P11230 501 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 ADH5P11766 374 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 CD86P42081 329 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 MAGEA6P43360 314 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 RGRP47804 291 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 RENBPP51606 427 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 ARL4CP56559 192 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 PDIA2Q13087 525 aaKnown RBP10.19□□□□□ -0.78
CRLF3-202ENST00000577725 PRPSAP1Q14558 356 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 IHHQ14623 411 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 PCSK7Q16549 785 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 HIF1AQ16665 826 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 PITRM1Q5JRX3 1037 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 NAIF1Q69YI7 327 aaPredicted RBP10.19□□□□□ -0.78
CRLF3-202ENST00000577725 ZNF783Q6ZMS7 281 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 KDELC2Q7Z4H8 507 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 CAND1Q86VP6 1230 aaKnown RBP10.19□□□□□ -0.78
CRLF3-202ENST00000577725 IGDCC3Q8IVU1 814 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 ADGRG2Q8IZP9 1017 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 MPP5Q8N3R9 675 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 ZNF843Q8N446 348 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 TEX26Q8N6G2 289 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 IPMKQ8NFU5 416 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 OR2W6PQ8NHA6 318 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 FIBINQ8TAL6 211 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.19□□□□□ -0.78
CRLF3-202ENST00000577725 ZC3H10Q96K80 434 aaKnown RBP10.19□□□□□ -0.78
CRLF3-202ENST00000577725 EXOC2Q96KP1 924 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 SERPINB12Q96P63 405 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 VAT1Q99536 393 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 FICDQ9BVA6 458 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 CINPQ9BW66 212 aaPredicted RBP10.19□□□□□ -0.78
CRLF3-202ENST00000577725 TRPV4Q9HBA0 871 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 LRRC4CQ9HCJ2 640 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 ZFP14Q9HCL3 533 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 HPS4Q9NQG7 708 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 KIAA1522Q9P206 1035 aaPredicted RBP10.19□□□□□ -0.78
CRLF3-202ENST00000577725 CHMP2BQ9UQN3 213 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 RAXQ9Y2V3 346 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 FCF1Q9Y324 198 aaKnown RBP10.19□□□□□ -0.78
CRLF3-202ENST00000577725 MYLKQ15746 1914 aa10.19□□□□□ -0.78
CRLF3-202ENST00000577725 OTOL1A6NHN0 477 aaPredicted RBP10.18□□□□□ -0.78
CRLF3-202ENST00000577725 NDC80O14777 642 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 TMCC1O94876 653 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 ACSL3O95573 720 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 AP2A1O95782 977 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 AGTP01019 485 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 MMP2P08253 660 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 PABPC1P11940 636 aaKnown RBP10.18□□□□□ -0.78
CRLF3-202ENST00000577725 MGAT1P26572 445 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 HLA-FP30511 346 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 MAGEA4P43358 317 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 SLC6A11P48066 632 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 STK19P49842 368 aaPredicted RBP10.18□□□□□ -0.78
CRLF3-202ENST00000577725 SESN2P58004 480 aaPredicted RBP10.18□□□□□ -0.78
CRLF3-202ENST00000577725 CRADDP78560 199 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 SIM1P81133 766 aaPredicted RBP10.18□□□□□ -0.78
CRLF3-202ENST00000577725 KDSRQ06136 332 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 SRSF1Q07955 248 aaKnown RBP eCLIP10.18□□□□□ -0.78
CRLF3-202ENST00000577725 HNRNPDQ14103 355 aaKnown RBP10.18□□□□□ -0.78
CRLF3-202ENST00000577725 LRRC32Q14392 662 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 KYNUQ16719 465 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 GAB4Q2WGN9 574 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 PLEKHG6Q3KR16 790 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 MPP7Q5T2T1 576 aa10.18□□□□□ -0.78
CRLF3-202ENST00000577725 CFAP58Q5T655 872 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms