RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 ZSCAN30Q86W11 494 aa13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 CPNE8Q86YQ8 564 aa13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 DCP2Q8IU60 420 aaKnown RBP13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 PSTKQ8IV42 348 aaKnown RBP13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 FAM174AQ8TBP5 190 aa13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 SYN2Q92777 582 aaPredicted RBP13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 IFT43Q96FT9 208 aa13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 APOLD1Q96LR9 279 aa13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 SUV39H2Q9H5I1 410 aa13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 SP110Q9HB58 689 aa13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 NLGN3Q9NZ94 848 aa13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 CAPN11Q9UMQ6 739 aa13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 GPSM3Q9Y4H4 160 aa13.71□□□□□ -0.21
CUEDC1-204ENST00000577497 LRRK1Q38SD2 2015 aa13.71□□□□□ -0.22
CUEDC1-204ENST00000577497 ANKRD11Q6UB99 2663 aaPredicted RBP13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 SCAMP1O15126 338 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 PEX11BO96011 259 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 RARAP10276 462 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 CKMT1AP12532 417 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 C6P13671 934 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 JUNDP17535 347 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 AMPD1P23109 780 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 CASP14P31944 242 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 HNF1BP35680 557 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 HCAR3P49019 387 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 HNRNPKP61978 463 aaKnown RBP eCLIP13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 DAB2P98082 770 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 SLC25A11Q02978 314 aaKnown RBP13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 SLC10A7Q0GE19 358 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 ILKQ13418 452 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 DEFB133Q30KQ1 61 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 C19orf48Q6RUI8 117 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 POLNQ7Z5Q5 900 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 SRLQ86TD4 932 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 PDCD7Q8N8D1 485 aaKnown RBP13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 CSPG4P5Q96PW8 444 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 NUP85Q9BW27 656 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 CINPQ9BW66 212 aaPredicted RBP13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 DONSONQ9NYP3 566 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 DKK4Q9UBT3 224 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 IPO11Q9UI26 975 aaKnown RBP13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 ANAPC7Q9UJX3 599 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 NENFQ9UMX5 172 aa13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 GOLGA4Q13439 2230 aaKnown RBP13.7□□□□□ -0.22
CUEDC1-204ENST00000577497 GOLGA6L19H0YKK7 550 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 H3BRJ5 948 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 RIOK3O14730 519 aaKnown RBP13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 GCATO75600 419 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 CYP1A2P05177 515 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 CELA2BP08218 269 aaPredicted RBP13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 CD48P09326 243 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 XPAP23025 273 aaPredicted RBP13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 MMP12P39900 470 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 LIG3P49916 1009 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 IL10RBQ08334 325 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 RALGDSQ12967 914 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 C1orf61Q13536 156 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 WSCD2Q2TBF2 565 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 KCTD16Q68DU8 428 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 PGBD5Q8N414 524 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 NIPA2Q8N8Q9 360 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 HCAR2Q8TDS4 363 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 LMX1AQ8TE12 382 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 RFFLQ8WZ73 363 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 ECHDC3Q96DC8 303 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 ZNF641Q96N77 438 aaPredicted RBP13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 TUBGCP5Q96RT8 1024 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 LRRC61Q9BV99 259 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 XPO4Q9C0E2 1151 aaKnown RBP13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 PCDH18Q9HCL0 1135 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 ATP8A1Q9Y2Q0 1164 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 LUC7L2Q9Y383 392 aaKnown RBP13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 BZW2Q9Y6E2 419 aaKnown RBP13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 APC2O95996 2303 aa13.69□□□□□ -0.22
CUEDC1-204ENST00000577497 ANKRD36A6QL64 1941 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 MYLKQ15746 1914 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 H3BM21 787 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 TRAFD1O14545 582 aaPredicted RBP13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 CASC3O15234 703 aaKnown RBP13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 AQP9O43315 295 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 CDK4P11802 303 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 GM2AP17900 193 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 SERPINA4P29622 427 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 EIF4A3P38919 411 aaKnown RBP13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 CSNK1DP48730 415 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 SCNN1BP51168 640 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 THOP1P52888 689 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 ELP6Q0PNE2 266 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 MMRN1Q13201 1228 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 PIGHQ14442 188 aaPredicted RBP13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 LBRQ14739 615 aaKnown RBP13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 GRM3Q14832 879 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 ACAP1Q15027 740 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 LRRC14Q15048 493 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 TCEA2Q15560 299 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 NFKBIBQ15653 356 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 BOLA3Q53S33 107 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 CFAP58Q5T655 872 aa13.68□□□□□ -0.22
CUEDC1-204ENST00000577497 ALKBH5Q6P6C2 394 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms