RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 PRIM2P49643 509 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 ZNF177Q13360 481 aaPredicted RBP18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 MSLNQ13421 630 aaPredicted RBP18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 TRAF7Q6Q0C0 670 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 NT5DC4Q86YG4 428 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 PGAM4Q8N0Y7 254 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 CDCA5Q96FF9 252 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 SMARCD1Q96GM5 515 aa18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.01■□□□□ 0.47
ATPAF1-214ENST00000576409 ATP6V1G1O75348 118 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 ATG7O95352 703 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 ZNF37AP17032 561 aaPredicted RBP18■□□□□ 0.47
ATPAF1-214ENST00000576409 HDCP19113 662 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 DCP1BQ8IZD4 617 aaKnown RBP18■□□□□ 0.47
ATPAF1-214ENST00000576409 FTHL17Q9BXU8 183 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 ZNF112Q9UJU3 913 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 TOR1BO14657 336 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 IDH2P48735 452 aaKnown RBP18■□□□□ 0.47
ATPAF1-214ENST00000576409 RAP1GAP2Q684P5 730 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 PLD6Q8N2A8 252 aaKnown RBP18■□□□□ 0.47
ATPAF1-214ENST00000576409 SFRP1Q8N474 314 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 SKA1Q96BD8 255 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 FCRL2Q96LA5 508 aaPredicted RBP18■□□□□ 0.47
ATPAF1-214ENST00000576409 ELOVL6Q9H5J4 265 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 UXTQ9UBK9 157 aaPredicted RBP18■□□□□ 0.47
ATPAF1-214ENST00000576409 MAFBQ9Y5Q3 323 aaPredicted RBP18■□□□□ 0.47
ATPAF1-214ENST00000576409 A0A1B0GVG6 124 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 FOXD2O60548 495 aaPredicted RBP18■□□□□ 0.47
ATPAF1-214ENST00000576409 FAM20BO75063 409 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 TOMM70O94826 608 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 DEFA1P59665 94 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 DEFA3P59666 94 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 GALNT3Q14435 633 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 RGS21Q2M5E4 152 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 B3GALT6Q96L58 329 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 PKP2Q99959 881 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 POLG2Q9UHN1 485 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 INVSQ9Y283 1065 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 NUMA1Q14980 2115 aa18■□□□□ 0.47
ATPAF1-214ENST00000576409 AZIN1O14977 448 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 CES1P23141 567 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 MZF1P28698 734 aaPredicted RBP17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 ALDH4A1P30038 563 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 HALP42357 657 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 TJAP1Q5JTD0 557 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 SYPL2Q5VXT5 272 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 TMEM214Q6NUQ4 689 aaKnown RBP17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 ADCK2Q7Z695 626 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 C11orf96Q7Z7L8 435 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 TTC30AQ86WT1 665 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 CLHC1Q8NHS4 586 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 HSPBAP1Q96EW2 488 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 QKIQ96PU8 341 aaKnown RBP eCLIP17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 CXorf21Q9HAI6 301 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 GCATO75600 419 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 OXCT1P55809 520 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 SLC18A2Q05940 514 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 KCNJ11Q14654 390 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 TAS1R3Q7RTX0 852 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 C8orf59Q8N0T1 100 aaPredicted RBP17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 MCRS1Q96EZ8 462 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 PDGFDQ9GZP0 370 aaPredicted RBP17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 GIMAP4Q9NUV9 329 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 WDR70Q9NW82 654 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 TMA7Q9Y2S6 64 aaKnown RBP17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 RFPL1O75677 317 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 LRIG2O94898 1065 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 INSCQ1MX18 579 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 METTL21CQ5VZV1 264 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 ZNF621Q6ZSS3 439 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 GPSM1Q86YR5 675 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 PSMA8Q8TAA3 256 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 PPP1R2P1Q96PQ5 205 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 COLEC11Q9BWP8 271 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 NDEL1Q9GZM8 345 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 DNAJC28Q9NX36 388 aa17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 ZNF214Q9UL59 606 aaPredicted RBP17.99■□□□□ 0.47
ATPAF1-214ENST00000576409 L1CAMP32004 1257 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 BRCC3P46736 316 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 CYP4F2P78329 520 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 CYP4F3Q08477 520 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 KRT33BQ14525 404 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 TMC5Q6UXY8 1006 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 GLT6D1Q7Z4J2 308 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 EID3Q8N140 333 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 ENDOVQ8N8Q3 282 aaKnown RBP17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 HEXDCQ8WVB3 486 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 CANT1Q8WVQ1 401 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 KATNAL1Q9BW62 490 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 OXCT2Q9BYC2 517 aaPredicted RBP17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 ALG2Q9H553 416 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 TRNAU1APQ9NX07 287 aaKnown RBP17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 SH3BP4Q9P0V3 963 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 C5orf58C9J3I9 102 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 PMM2O15305 246 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 GRIN3BO60391 1043 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 CCNA2P20248 432 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 CTXN3Q4LDR2 81 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 SLC39A12Q504Y0 691 aa17.98■□□□□ 0.47
ATPAF1-214ENST00000576409 CAND1Q86VP6 1230 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms