RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PROB1E7EW31 1015 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 C1QTNF3-AMACRE9PGA6 284 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 APOC4-APOC2K7ER74 178 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 PGRMC1O00264 195 aaKnown RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 TRAFD1O14545 582 aaPredicted RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 ALOX15BO15296 676 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 RAD51BO15315 384 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 ZBTB24O43167 697 aaPredicted RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 ATP8B1O43520 1251 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 PLRG1O43660 514 aaKnown RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 GDF9O60383 454 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 RNASEH1O60930 286 aaKnown RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 NDUFS2O75306 463 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 MT-CYBP00156 380 aaPredicted RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 APOC2P02655 101 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 PRNPP04156 253 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 WNT1P04628 370 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 PDHA1P08559 390 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 ALPIP09923 528 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 CCNB1P14635 433 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 TIMP2P16035 220 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 CTPS1P17812 591 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 NFKB1P19838 968 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 TGM2P21980 687 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 TGM1P22735 817 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 ITGB7P26010 798 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 TNFRSF8P28908 595 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 PTPN7P35236 360 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 MPLP40238 635 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 CD86P42081 329 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 PI4KAP42356 2102 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 PAFAH1B1P43034 410 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 GEMIN4P57678 1058 aaKnown RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 VSNL1P62760 191 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 SKOR1P84550 965 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 BNC1Q01954 994 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 ZNF33AQ06730 810 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 SLC20A2Q08357 652 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 GALNT3Q14435 633 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 SIX1Q15475 284 aaPredicted RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 PCSK7Q16549 785 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 GLE1Q53GS7 698 aaKnown RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 INO80DQ53TQ3 878 aaPredicted RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 SYCP2LQ5T4T6 812 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 FAXCQ5TGI0 409 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 MARC1Q5VT66 337 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 ERN2Q76MJ5 926 aaKnown RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 LPCAT2Q7L5N7 544 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 CYP2U1Q7Z449 544 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 KDELC2Q7Z4H8 507 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 METTL3Q86U44 580 aaKnown RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 TSPAN33Q86UF1 283 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 PELI3Q8N2H9 469 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 GLIS1Q8NBF1 620 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 C1orf54Q8WWF1 131 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 FAM122AQ96E09 287 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 ZC3H10Q96K80 434 aaKnown RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 RBM15Q96T37 977 aaKnown RBP eCLIP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 SEMA3CQ99985 751 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 BTBD1Q9H0C5 482 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 FBRSQ9HAH7 460 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 SCUBE2Q9NQ36 999 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 NCDNQ9UBB6 729 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 ATP8A1Q9Y2Q0 1164 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 FADS3Q9Y5Q0 445 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 TRPM6Q9BX84 2022 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 PIEZO1Q92508 2521 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TBC1D3DA0A087WVF3 549 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TBC1D3IA0A087WXS9 549 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TBC1D3EA0A087X179 549 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TBC1D3KA0A087X1G2 549 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 A0A1W2PQU0 124 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TSPAN11A1L157 253 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 BCLAF3A2AJT9 711 aaKnown RBP7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TBC1D3FA6NER0 549 aaPredicted RBP7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TBC1D3LB9A6J9 549 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 H7C0C1 242 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 CCDC188H7C350 402 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 PPP1R12AO14974 1030 aaPredicted RBP7.97□□□□□ -1.13
CCDC40-215ENST00000576033 RNGTTO60942 597 aaKnown RBP7.97□□□□□ -1.13
CCDC40-215ENST00000576033 ZNF217O75362 1048 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 RHOXF2BP0C7M4 288 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TBC1D3HP0C7X1 549 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 PIRTP0C851 137 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 ETS1P14921 441 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 GM2AP17900 193 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 LHCGRP22888 699 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 CCNCP24863 283 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 CHRNA4P43681 627 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 ATP5OP48047 213 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 NEK3P51956 506 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 CLDN2P57739 230 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 EIF3EP60228 445 aaKnown RBP7.97□□□□□ -1.13
CCDC40-215ENST00000576033 IFI35P80217 286 aaPredicted RBP7.97□□□□□ -1.13
CCDC40-215ENST00000576033 ZBTB16Q05516 673 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 RALGDSQ12967 914 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 SNX1Q13596 522 aa7.97□□□□□ -1.13
CCDC40-215ENST00000576033 TFDP2Q14188 446 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms