RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 TMEM52BQ4KMG9 183 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 KIAA1161Q6NSJ0 714 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 PSAPL1Q6NUJ1 521 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 NPNTQ6UXI9 565 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 KYAT3Q6YP21 454 aaKnown RBP8.76□□□□□ -1.01
SMG6-216ENST00000575176 SRLQ86TD4 932 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 IQCHQ86VS3 1027 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 NAXDQ8IW45 347 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 CBARPQ8N350 705 aaPredicted RBP8.76□□□□□ -1.01
SMG6-216ENST00000575176 ATPAF2Q8N5M1 289 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 MFSD2AQ8NA29 543 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 DEFB124Q8NES8 71 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 OR13H1Q8NG92 308 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 HCAR2Q8TDS4 363 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 SAP25Q8TEE9 199 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 GANCQ8TET4 914 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 ASB12Q8WXK4 309 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 ALG3Q92685 438 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 KLK6Q92876 244 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 RAB7BQ96AH8 199 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 CENPTQ96BT3 561 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 PPP1R16AQ96I34 528 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 SERAC1Q96JX3 654 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 LENG8Q96PV6 779 aaPredicted RBP8.76□□□□□ -1.01
SMG6-216ENST00000575176 MCCC1Q96RQ3 725 aaPredicted RBP8.76□□□□□ -1.01
SMG6-216ENST00000575176 NUDCD1Q96RS6 583 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 TUBGCP5Q96RT8 1024 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 IL12RB2Q99665 862 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 MYOCQ99972 504 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 GORASP1Q9BQQ3 440 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 DESI2Q9BSY9 194 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 GTPBP2Q9BX10 602 aaKnown RBP8.76□□□□□ -1.01
SMG6-216ENST00000575176 CALN1Q9BXU9 219 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 GAREM1Q9H706 876 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 SP110Q9HB58 689 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 NOD2Q9HC29 1040 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 PCDH12Q9NPG4 1184 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 KLF15Q9UIH9 416 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 PCOLCE2Q9UKZ9 415 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 HPCAL4Q9UM19 191 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 PCDHGB2Q9Y5G2 931 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 ALG6Q9Y672 507 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 CAPN6Q9Y6Q1 641 aa8.76□□□□□ -1.01
SMG6-216ENST00000575176 ARHGEF17Q96PE2 2063 aaPredicted RBP8.76□□□□□ -1.01
SMG6-216ENST00000575176 GOLGA4Q13439 2230 aaKnown RBP8.76□□□□□ -1.01
SMG6-216ENST00000575176 CHD6Q8TD26 2715 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 hCG_1818297A0A087WSY0 165 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 TBC1D3DA0A087WVF3 549 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 TBC1D3IA0A087WXS9 549 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 TBC1D3EA0A087X179 549 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 TBC1D3KA0A087X1G2 549 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 LY6G6EA0A0G2JKS1 128 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 LRRD1A4D1F6 860 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 TBC1D3FA6NER0 549 aaPredicted RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 IGLON5A6NGN9 336 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 TBC1D3LB9A6J9 549 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 PRAMEF26H0Y7S4 382 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 RIOK3O14730 519 aaKnown RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 SH3BP5O60239 455 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 PALMO75781 387 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 CER1O95813 267 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 TOP3BO95985 862 aaKnown RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 KRT1P04264 644 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 SYPP08247 313 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 TBC1D3HP0C7X1 549 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 HNRNPA2B1P22626 353 aaKnown RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 CTNNA1P35221 906 aaKnown RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 NUDT1P36639 197 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 SLC1A1P43005 524 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 RECQLP46063 649 aaPredicted RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 RXRGP48443 463 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 PEX5P50542 639 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 CLDN2P57739 230 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 AP1S1P61966 158 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 IFI35P80217 286 aaPredicted RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 CCZ1BP86790 482 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 CCZ1P86791 482 aaPredicted RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 SEMG2Q02383 582 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 SFSWAPQ12872 951 aaKnown RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 SLC14A1Q13336 389 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 KRT81Q14533 505 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 PRKD1Q15139 912 aaPredicted RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 HADHQ16836 314 aaKnown RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 UGP2Q16851 508 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 SETMARQ53H47 684 aaPredicted RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 N4BP2L1Q5TBK1 243 aaPredicted RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 TBC1D3GQ6DHY5 549 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 TBC1D3CQ6IPX1 549 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 GLRX5Q86SX6 157 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 TMTC1Q8IUR5 882 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 KATNAL2Q8IYT4 538 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 TBC1D3Q8IZP1 549 aaPredicted RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 DENND6BQ8NEG7 585 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 PIH1D2Q8WWB5 315 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 ZNF641Q96N77 438 aaPredicted RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 LGMNQ99538 433 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 ELF4Q99607 663 aaPredicted RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 CINPQ9BW66 212 aaPredicted RBP8.75□□□□□ -1.01
SMG6-216ENST00000575176 SUV39H2Q9H5I1 410 aa8.75□□□□□ -1.01
SMG6-216ENST00000575176 ERVMER34-1Q9H9K5 563 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms