RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 FZD10Q9ULW2 581 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 ARHGAP26Q9UNA1 814 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 MTF2Q9Y483 593 aaPredicted RBP8.6□□□□□ -1.03
RPAIN-215ENST00000575112 SHROOM3Q8TF72 1996 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 PDLIM1O00151 329 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 TRIM13O60858 407 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 KATNA1O75449 491 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 STMN1P16949 149 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 MAGEA3P43357 314 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 RXRGP48443 463 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 NAA20P61599 178 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 PTPRRQ15256 657 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 OGFOD2Q6N063 350 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 LINGO4Q6UY18 593 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 GK5Q6ZS86 529 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 TICAM1Q8IUC6 712 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 ZNF513Q8N8E2 541 aaPredicted RBP8.6□□□□□ -1.03
RPAIN-215ENST00000575112 HDAC10Q969S8 669 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 EPS15L1Q9UBC2 864 aa8.6□□□□□ -1.03
RPAIN-215ENST00000575112 FAM95CA0A1B0GW59 222 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 BCLAF3A2AJT9 711 aaKnown RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 PABPN1LA6NDY0 278 aaKnown RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 G3V2L1 256 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 DENRO43583 198 aaKnown RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 KLHL2O95198 593 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 PARNO95453 639 aaKnown RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 PRSS56P0CW18 603 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 CDH5P33151 784 aaPredicted RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 PNPLA4P41247 253 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 PIK3CGP48736 1102 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 APOFQ13790 326 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 CNSTQ6PJW8 725 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 EPGNQ6UW88 154 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 TMCO2Q7Z6W1 182 aaPredicted RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 C14orf80Q86SX3 495 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 RSPH1Q8WYR4 309 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 CMTM5Q96DZ9 223 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 DTNBP1Q96EV8 351 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 LRCH3Q96II8 777 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 HSFY1Q96LI6 401 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 YIPF2Q9BWQ6 316 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 DCDC2Q9UHG0 476 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 ZNF232Q9UNY5 417 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 NUMA1Q14980 2115 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 COL11A1P12107 1806 aaPredicted RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 J3KR12 359 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 PTGESO14684 152 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 GUCA1CO95843 209 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 ASGR1P07306 291 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 ODC1P11926 461 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 IMPDH2P12268 514 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 ZNF26P17031 533 aaPredicted RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 OR1E1P30953 314 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 YAP1P46937 504 aaKnown RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 PDAP1Q13442 181 aaKnown RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 DBN1Q16643 649 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 POM121L1PQ3SYA9 428 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 PIGGQ5H8A4 983 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 SEL1L3Q68CR1 1132 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 NAPEPLDQ6IQ20 393 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 DNAJC14Q6Y2X3 702 aaPredicted RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 USP50Q70EL3 339 aaPredicted RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 ZNF598Q86UK7 904 aaKnown RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 UNC93AQ86WB7 457 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 ZNF280BQ86YH2 543 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 TTC39CQ8N584 583 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 TMEM102Q8N9M5 508 aaPredicted RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 CCT7Q99832 543 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 TM6SF2Q9BZW4 377 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 POMKQ9H5K3 350 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 PCDHGA4Q9Y5G9 962 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 DNAJC25-GNG10A0A024R161 153 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 A0A1W2PQ67 120 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 KCNU1A8MYU2 1149 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 CNTN5O94779 1100 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 FAM58BPP0C7Q3 252 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 CHRM3P20309 590 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 GGT5P36269 586 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 DAOAP59103 153 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 NIPAL4Q0D2K0 466 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 KYAT1Q16773 422 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 PPP1R3AQ16821 1122 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 ZRANB3Q5FWF4 1079 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 RBM20Q5T481 1227 aaKnown RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 MFSD14CQ5VZR4 134 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 PIM3Q86V86 326 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 LRRTM3Q86VH5 581 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 SNX29P2Q8IUI4 249 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 SMG8Q8ND04 991 aaKnown RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 OR9I1Q8NGQ6 314 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 CASP10Q92851 521 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 FAM210AQ96ND0 272 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 QKIQ96PU8 341 aaKnown RBP eCLIP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 APOL5Q9BWW9 433 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 SLC39A8Q9C0K1 460 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 NOL11Q9H8H0 719 aaKnown RBP8.59□□□□□ -1.03
RPAIN-215ENST00000575112 STK39Q9UEW8 545 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 EGFL7Q9UHF1 273 aa8.59□□□□□ -1.03
RPAIN-215ENST00000575112 GABRQQ9UN88 632 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms