RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 FRMD1Q8N878 549 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 C12orf50Q8NA57 414 aaPredicted RBP14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 PRSS33Q8NF86 280 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 SPATA22Q8NHS9 363 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 GRK7Q8WTQ7 553 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 NELL1Q92832 810 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 IFT43Q96FT9 208 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 TOE1Q96GM8 510 aaKnown RBP14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 PPP1R2P1Q96PQ5 205 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 GBA3Q9H227 469 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 KCNH6Q9H252 994 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 GOLGA6AQ9NYA3 693 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 UBP1Q9NZI7 540 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 SERGEFQ9UGK8 458 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 FAM153AQ9UHL3 310 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 CHKBQ9Y259 395 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 CACNA1HO95180 2353 aa14.64□□□□□ -0.07
NPLOC4-218ENST00000574964 TBC1D3DA0A087WVF3 549 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TBC1D3IA0A087WXS9 549 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TBC1D3EA0A087X179 549 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TBC1D3KA0A087X1G2 549 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TBC1D3FA6NER0 549 aaPredicted RBP14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 PRR23AA6NEV1 266 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 LRRC72A6NJI9 287 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 UPK3BL1B0FP48 263 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TBC1D3LB9A6J9 549 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 UPK3BL2E5RIL1 263 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 CCDC188H7C350 402 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 PCDH8O95206 1070 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 SEMA4FO95754 770 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 MT-CYBP00156 380 aaPredicted RBP14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 IGLV3-19P01714 112 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TBC1D3HP0C7X1 549 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 ADRB3P13945 408 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TIMP2P16035 220 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 PSMB4P28070 264 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 ACSL1P33121 698 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 SKOR1P84550 965 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 RPL6Q02878 288 aaKnown RBP14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TCF15Q12870 199 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 SRSF5Q13243 272 aaKnown RBP14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 MPP3Q13368 585 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 SIM2Q14190 667 aaPredicted RBP14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 CYP1B1Q16678 543 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 PARP6Q2NL67 630 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 PIP5KL1Q5T9C9 394 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TBC1D3GQ6DHY5 549 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TBC1D3CQ6IPX1 549 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 ERAP2Q6P179 960 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 PRR23BQ6ZRT6 265 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 PRPF39Q86UA1 669 aaKnown RBP14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TBC1D3Q8IZP1 549 aaPredicted RBP14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TAB3Q8N5C8 712 aaPredicted RBP14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 ZBTB44Q8NCP5 570 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 ATOH1Q92858 354 aaPredicted RBP14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 RAB7BQ96AH8 199 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 NSMCE3Q96MG7 304 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 GPR174Q9BXC1 333 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TDRD1Q9BXT4 1180 aaKnown RBP14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 DDX47Q9H0S4 455 aaKnown RBP14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 PCDH9Q9HC56 1237 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 VPS45Q9NRW7 570 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 WSB2Q9NYS7 404 aaPredicted RBP14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 PAK5Q9P286 719 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 CDC23Q9UJX2 597 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 PHTF1Q9UMS5 762 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 AAR2Q9Y312 384 aaKnown RBP14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 R4GN57 208 aa14.63□□□□□ -0.07
NPLOC4-218ENST00000574964 TRAFD1O14545 582 aaPredicted RBP14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 HTRA2O43464 458 aaPredicted RBP14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 HRO43593 1189 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 PGLSO95336 258 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 GAS8O95995 478 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 MMP2P08253 660 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 ETS1P14921 441 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 LMAN1P49257 510 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 FNTAP49354 379 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 SUOXP51687 545 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 ADPRHP54922 357 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 ELP6Q0PNE2 266 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 ELF2Q15723 593 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 SLC14A2Q15849 920 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 UGP2Q16851 508 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 LRRC73Q5JTD7 316 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 DNTTIP2Q5QJE6 756 aaKnown RBP14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 AGBL4Q5VU57 503 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 C4orf22Q6V702 233 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 LPCAT2Q7L5N7 544 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 KDELC2Q7Z4H8 507 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 KLHL7Q8IXQ5 586 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 LPCAT1Q8NF37 534 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 IPMKQ8NFU5 416 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 OR2T34Q8NGX1 318 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 RMDN1Q96DB5 314 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 ECHDC3Q96DC8 303 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 RTP4Q96DX8 246 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 RUNDC3BQ96NL0 473 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 FSD1LQ9BXM9 530 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 ADGRE3Q9BY15 652 aa14.62□□□□□ -0.07
NPLOC4-218ENST00000574964 RAB23Q9ULC3 237 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms