RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 DR1Q01658 176 aa17.23■□□□□ 0.35
NUP88-210ENST00000574867 C2orf54Q08AI8 447 aa17.23■□□□□ 0.35
NUP88-210ENST00000574867 CNTN1Q12860 1018 aa17.23■□□□□ 0.35
NUP88-210ENST00000574867 PPP1R7Q15435 360 aa17.23■□□□□ 0.35
NUP88-210ENST00000574867 KLHDC8BQ8IXV7 354 aa17.23■□□□□ 0.35
NUP88-210ENST00000574867 GANCQ8TET4 914 aa17.23■□□□□ 0.35
NUP88-210ENST00000574867 PDCD6IPQ8WUM4 868 aaKnown RBP17.23■□□□□ 0.35
NUP88-210ENST00000574867 RAB7BQ96AH8 199 aa17.23■□□□□ 0.35
NUP88-210ENST00000574867 SPACA7Q96KW9 195 aa17.23■□□□□ 0.35
NUP88-210ENST00000574867 GORASP1Q9BQQ3 440 aa17.23■□□□□ 0.35
NUP88-210ENST00000574867 ERI2A8K979 691 aaKnown RBP17.22■□□□□ 0.35
NUP88-210ENST00000574867 F5H423 210 aaPredicted RBP17.22■□□□□ 0.35
NUP88-210ENST00000574867 FZD6O60353 706 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 METTL18O95568 372 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 CPP00450 1065 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 ADRB3P13945 408 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 ETS1P14921 441 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 OXTRP30559 389 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 P2RY2P41231 377 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 IHHQ14623 411 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 USP39Q53GS9 565 aaKnown RBP17.22■□□□□ 0.35
NUP88-210ENST00000574867 AGBL4Q5VU57 503 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 FBXL19Q6PCT2 694 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 CEP112Q8N8E3 955 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 NELL1Q92832 810 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 FEM1CQ96JP0 617 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 KRT12Q99456 494 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 PRRX2Q99811 253 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 FSD1LQ9BXM9 530 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 ADGRE3Q9BY15 652 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 UBP1Q9NZI7 540 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 NEU2Q9Y3R4 380 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 PCDHB9Q9Y5E1 797 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.22■□□□□ 0.35
NUP88-210ENST00000574867 PSMD3O43242 534 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 PMPCBO75439 489 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 ZSCAN5DPP0CG00 497 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 XPAP23025 273 aaPredicted RBP17.22■□□□□ 0.35
NUP88-210ENST00000574867 CDK18Q07002 472 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 PTK6Q13882 451 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 PIP5KL1Q5T9C9 394 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 KDELC1Q6UW63 502 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 IFT43Q96FT9 208 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 RAB6BQ9NRW1 208 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 SERGEFQ9UGK8 458 aa17.22■□□□□ 0.35
NUP88-210ENST00000574867 CTAGE15A4D2H0 777 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 UPK3BL1B0FP48 263 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 UPK3BL2E5RIL1 263 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 EPOP01588 193 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 CTAGE8P0CG41 777 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 PTGIRP43119 386 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 FNTBP49356 437 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 WNT3AP56704 352 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 DMWDQ09019 674 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 SEMA5AQ13591 1074 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 PCSK7Q16549 785 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 UGP2Q16851 508 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 MAATS1Q7Z4T9 603 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 PRUNE1Q86TP1 453 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 CTAGE6Q86UF2 777 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 CTAGE4Q8IX94 777 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 NDUFAF2Q8N183 169 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 IPMKQ8NFU5 416 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 MRGPRX2Q96LB1 330 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 TRIB3Q96RU7 358 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 MLPHQ9BV36 600 aaPredicted RBP17.21■□□□□ 0.35
NUP88-210ENST00000574867 LRRC40Q9H9A6 602 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 SGK2Q9HBY8 427 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 PHTF1Q9UMS5 762 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 CYP8B1Q9UNU6 501 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 EML5Q05BV3 1969 aa17.21■□□□□ 0.35
NUP88-210ENST00000574867 E7EVH7 732 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 SP9P0CG40 484 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 GRIA4P48058 902 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 TRIP13Q15645 432 aaPredicted RBP17.2■□□□□ 0.34
NUP88-210ENST00000574867 MAP7D1Q3KQU3 841 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 FAXCQ5TGI0 409 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.2■□□□□ 0.34
NUP88-210ENST00000574867 ZSWIM9Q86XI8 627 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 JAMLQ86YT9 394 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 BTBD1Q9H0C5 482 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 NEUROG2Q9H2A3 272 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 KDM4CQ9H3R0 1056 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 L2HGDHQ9H9P8 463 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 ETNK1Q9HBU6 452 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 EIF2B3Q9NR50 452 aaKnown RBP17.2■□□□□ 0.34
NUP88-210ENST00000574867 ZSCAN32Q9NX65 697 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 CHKBQ9Y259 395 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 PLRG1O43660 514 aaKnown RBP17.2■□□□□ 0.34
NUP88-210ENST00000574867 AP1G1O43747 822 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 AP2A1O95782 977 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 CD6P30203 668 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 EPHB1P54762 984 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 ADPRHP54922 357 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 BASP1P80723 227 aaKnown RBP17.2■□□□□ 0.34
NUP88-210ENST00000574867 ELP6Q0PNE2 266 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 GPS1Q13098 491 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 KCTD11Q693B1 232 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 CCDC70Q6NSX1 233 aa17.2■□□□□ 0.34
NUP88-210ENST00000574867 ERAP2Q6P179 960 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms