RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 SPCS2Q15005 226 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 MAPRE2Q15555 327 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 GOLGA7BQ2TAP0 167 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 TMEM135Q86UB9 458 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 RAVER1Q8IY67 606 aaKnown RBP14.53□□□□□ -0.08
SMG6-215ENST00000574501 HDAC10Q969S8 669 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 DNAI2Q9GZS0 605 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 TMPRSS4Q9NRS4 437 aa14.53□□□□□ -0.08
SMG6-215ENST00000574501 NME4O00746 187 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 B4GALT5O43286 388 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 JRKO75564 520 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 MYO1DO94832 1006 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 RASAL1O95294 804 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 ZBTB7AO95365 584 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 PSMA4P25789 261 aaKnown RBP14.52□□□□□ -0.08
SMG6-215ENST00000574501 YWHAQP27348 245 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 IFITM3Q01628 133 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 SURF1Q15526 300 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 ZIK1Q3SY52 487 aaPredicted RBP14.52□□□□□ -0.08
SMG6-215ENST00000574501 NT5DC4Q86YG4 428 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 ANKRD13AQ8IZ07 590 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 CENPNQ96H22 339 aaPredicted RBP14.52□□□□□ -0.08
SMG6-215ENST00000574501 ZNF347Q96SE7 839 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 HGH1Q9BTY7 390 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 BEGAINQ9BUH8 593 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 NDEL1Q9GZM8 345 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 SMARCAD1Q9H4L7 1026 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 FBRSL1Q9HCM7 1045 aaKnown RBP14.52□□□□□ -0.08
SMG6-215ENST00000574501 CYP4F12Q9HCS2 524 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 RNF146Q9NTX7 359 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 TBC1D13Q9NVG8 400 aa14.52□□□□□ -0.08
SMG6-215ENST00000574501 SMPD3Q9NY59 655 aaPredicted RBP14.52□□□□□ -0.08
SMG6-215ENST00000574501 MAP3K20Q9NYL2 800 aaKnown RBP14.52□□□□□ -0.08
SMG6-215ENST00000574501 LY75O60449 1722 aa14.52□□□□□ -0.09
SMG6-215ENST00000574501 CCDC162PA2VCL2 907 aa14.52□□□□□ -0.09
SMG6-215ENST00000574501 TARM1B6A8C7 271 aa14.52□□□□□ -0.09
SMG6-215ENST00000574501 C9JVG2 144 aa14.52□□□□□ -0.09
SMG6-215ENST00000574501 MAFGO15525 162 aa14.52□□□□□ -0.09
SMG6-215ENST00000574501 CPNE6O95741 557 aa14.52□□□□□ -0.09
SMG6-215ENST00000574501 MBL2P11226 248 aaPredicted RBP14.52□□□□□ -0.09
SMG6-215ENST00000574501 RETREG3Q86VR2 466 aa14.52□□□□□ -0.09
SMG6-215ENST00000574501 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.52□□□□□ -0.09
SMG6-215ENST00000574501 TXNDC5Q8NBS9 432 aaKnown RBP14.52□□□□□ -0.09
SMG6-215ENST00000574501 RNF149Q8NC42 400 aa14.52□□□□□ -0.09
SMG6-215ENST00000574501 TUBA1CQ9BQE3 449 aa14.52□□□□□ -0.09
SMG6-215ENST00000574501 POMKQ9H5K3 350 aa14.52□□□□□ -0.09
SMG6-215ENST00000574501 CD320Q9NPF0 282 aa14.52□□□□□ -0.09
SMG6-215ENST00000574501 BFARQ9NZS9 450 aa14.52□□□□□ -0.09
SMG6-215ENST00000574501 MAFBQ9Y5Q3 323 aaPredicted RBP14.52□□□□□ -0.09
SMG6-215ENST00000574501 MGAMO43451 1857 aa14.52□□□□□ -0.09
SMG6-215ENST00000574501 CLDN25C9JDP6 229 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 B4GALT4O60513 344 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 SEC14L2O76054 403 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 TOMM70O94826 608 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 AQP6Q13520 282 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 CAPRIN1Q14444 709 aaKnown RBP14.51□□□□□ -0.09
SMG6-215ENST00000574501 INPP5AQ14642 412 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 CCNYL2Q5T2Q4 361 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 PPP1R26Q5T8A7 1209 aaPredicted RBP14.51□□□□□ -0.09
SMG6-215ENST00000574501 EEF1DP3Q658K8 133 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 XAF1Q6GPH4 301 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 FAM45BPQ6NSW5 357 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 COLGALT2Q8IYK4 626 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 FAM45AQ8TCE6 357 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 RAB2BQ8WUD1 216 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 SLC25A23Q9BV35 468 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 PRDM12Q9H4Q4 367 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 WARS2Q9UGM6 360 aaKnown RBP14.51□□□□□ -0.09
SMG6-215ENST00000574501 HACD1B0YJ81 288 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 GABBR2O75899 941 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 MTHFD1P11586 935 aaKnown RBP14.51□□□□□ -0.09
SMG6-215ENST00000574501 NMBRP28336 390 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 RPS9P46781 194 aaKnown RBP14.51□□□□□ -0.09
SMG6-215ENST00000574501 PRKAA2P54646 552 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 TPTEP56180 551 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 DMPKQ09013 629 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 SLC12A1Q13621 1099 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 CARTPTQ16568 116 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 INAVAQ3KP66 663 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 C8orf82Q6P1X6 216 aaPredicted RBP14.51□□□□□ -0.09
SMG6-215ENST00000574501 ZNF773Q6PK81 442 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 LCLAT1Q6UWP7 414 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 FRA10AC1Q70Z53 315 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 SPRED1Q7Z699 444 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 FAM131BQ86XD5 332 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 CEP97Q8IW35 865 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 LRRC71Q8N4P6 559 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 Q8N9G6 341 aaPredicted RBP14.51□□□□□ -0.09
SMG6-215ENST00000574501 FAM151AQ8WW52 585 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 MUS81Q96NY9 551 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 GPR22Q99680 433 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 POLE4Q9NR33 117 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 KLHL8Q9P2G9 620 aaPredicted RBP14.51□□□□□ -0.09
SMG6-215ENST00000574501 DNMT3BQ9UBC3 853 aaKnown RBP14.51□□□□□ -0.09
SMG6-215ENST00000574501 ANKRD6Q9Y2G4 727 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 V9GYQ6 96 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 SIP14410 1827 aa14.51□□□□□ -0.09
SMG6-215ENST00000574501 GJB1P08034 283 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 NPR1P16066 1061 aa14.5□□□□□ -0.09
SMG6-215ENST00000574501 PLA2G16P53816 162 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms