RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 TAF4O00268 1085 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 MUSKO15146 869 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 GIMD1P0DJR0 217 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 IGFALSP35858 605 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 SEMG2Q02383 582 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 SLC25A11Q02978 314 aaKnown RBP26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 ELP6Q0PNE2 266 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 ZSWIM9Q86XI8 627 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 OR4C6Q8NH72 309 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 MDM1Q8TC05 714 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 TEKT4Q8WW24 435 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 TUBGCP5Q96RT8 1024 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 PCDH18Q9HCL0 1135 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 PCDH12Q9NPG4 1184 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 MBNL1Q9NR56 388 aaKnown RBP26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 KLF15Q9UIH9 416 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 NENFQ9UMX5 172 aa26.29■■□□□ 1.8
NPLOC4-215ENST00000574095 CSF2P04141 144 aa26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 PRKCGP05129 697 aa26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 HNRNPH3P31942 346 aaKnown RBP26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 SSR1P43307 286 aaKnown RBP26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 SUOXP51687 545 aa26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 HNRNPKP61978 463 aaKnown RBP eCLIP26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 SLC10A7Q0GE19 358 aa26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 RFTN1Q14699 578 aaPredicted RBP26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 HS1BP3Q53T59 392 aa26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 TMCO3Q6UWJ1 677 aa26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 PARGQ86W56 976 aa26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 TMPRSS12Q86WS5 348 aa26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 TP53I13Q8NBR0 393 aaPredicted RBP26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 CCDC86Q9H6F5 360 aaKnown RBP26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 ATP13A3Q9H7F0 1226 aa26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 DMXL2Q8TDJ6 3036 aa26.28■■□□□ 1.8
NPLOC4-215ENST00000574095 TRABD2BA6NFA1 517 aa26.27■■□□□ 1.8
NPLOC4-215ENST00000574095 NEBLO76041 1014 aa26.27■■□□□ 1.8
NPLOC4-215ENST00000574095 SERPINA4P29622 427 aa26.27■■□□□ 1.8
NPLOC4-215ENST00000574095 SCNN1BP51168 640 aa26.27■■□□□ 1.8
NPLOC4-215ENST00000574095 NSUN2Q08J23 767 aaKnown RBP eCLIP26.27■■□□□ 1.8
NPLOC4-215ENST00000574095 CAMK2BQ13554 666 aa26.27■■□□□ 1.8
NPLOC4-215ENST00000574095 LBRQ14739 615 aaKnown RBP26.27■■□□□ 1.8
NPLOC4-215ENST00000574095 BRAT1Q6PJG6 821 aa26.27■■□□□ 1.8
NPLOC4-215ENST00000574095 ZNF564Q8TBZ8 553 aaPredicted RBP26.27■■□□□ 1.8
NPLOC4-215ENST00000574095 NSMCE3Q96MG7 304 aa26.27■■□□□ 1.8
NPLOC4-215ENST00000574095 C1QTNF7Q9BXJ2 289 aa26.27■■□□□ 1.8
NPLOC4-215ENST00000574095 ZZEF1O43149 2961 aa26.27■■□□□ 1.8
NPLOC4-215ENST00000574095 FREM2Q5SZK8 3169 aa26.27■■□□□ 1.8
NPLOC4-215ENST00000574095 SHROOM3Q8TF72 1996 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 TTC24A2A3L6 582 aaPredicted RBP26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 RIOK3O14730 519 aaKnown RBP26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 CBFA2T2O43439 604 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 CDK4P11802 303 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 JUPP14923 745 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 NME1P15531 152 aaKnown RBP26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 ACP1P24666 158 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 THOP1P52888 689 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 DAB2P98082 770 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 BCL2L1Q07817 233 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 EIF2B5Q13144 721 aaKnown RBP26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 KRT81Q14533 505 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 SPECC1LQ69YQ0 1117 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 ERAP2Q6P179 960 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 PROSER1Q86XN7 944 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 CPNE8Q86YQ8 564 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 PSKH2Q96QS6 385 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 TSPY26PQ9H489 355 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 CTTNBP2NLQ9P2B4 639 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 SEPT3Q9UH03 358 aa26.26■■□□□ 1.79
NPLOC4-215ENST00000574095 NEMP2A6NFY4 417 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 H3BM21 787 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 SCAMP1O15126 338 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 CD48P09326 243 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 ALPPL2P10696 532 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 MYF5P13349 255 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 C6P13671 934 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 JUNDP17535 347 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 LIG3P49916 1009 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 CDH6P55285 790 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 MMRN1Q13201 1228 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 ILKQ13418 452 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 PTK2BQ14289 1009 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 IRF4Q15306 451 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 ATP13A4Q4VNC1 1196 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 TMCO4Q5TGY1 634 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 PAF1Q8N7H5 531 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 RNF214Q8ND24 703 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 ZNF548Q8NEK5 533 aaPredicted RBP26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 OR8K1Q8NGG5 319 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 ZNF599Q96NL3 588 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 PACSIN1Q9BY11 444 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 NLGN3Q9NZ94 848 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 ATP8A1Q9Y2Q0 1164 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 MYLKQ15746 1914 aa26.25■■□□□ 1.79
NPLOC4-215ENST00000574095 PEX11BO96011 259 aa26.24■■□□□ 1.79
NPLOC4-215ENST00000574095 IL4RP24394 825 aa26.24■■□□□ 1.79
NPLOC4-215ENST00000574095 GJC1P36383 396 aa26.24■■□□□ 1.79
NPLOC4-215ENST00000574095 RENBPP51606 427 aa26.24■■□□□ 1.79
NPLOC4-215ENST00000574095 YPEL5P62699 121 aa26.24■■□□□ 1.79
NPLOC4-215ENST00000574095 LRRC14Q15048 493 aa26.24■■□□□ 1.79
NPLOC4-215ENST00000574095 SLC18A3Q16572 532 aa26.24■■□□□ 1.79
NPLOC4-215ENST00000574095 HADHQ16836 314 aaKnown RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms