RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 SMTNL1A8MU46 457 aa21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 CSO75390 466 aaKnown RBP21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 ACTN2P35609 894 aa21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 SUOXP51687 545 aa21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 YPEL5P62699 121 aa21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 TMEM52BQ4KMG9 183 aa21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 SOWAHCQ53LP3 525 aaPredicted RBP21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 ERMARDQ5T6L9 678 aa21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 GUSBP11Q6P575 273 aa21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 EFL1Q7Z2Z2 1120 aaKnown RBP21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 TP53I13Q8NBR0 393 aaPredicted RBP21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 FGF11Q92914 225 aa21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 PEBP4Q96S96 227 aa21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 KCTD15Q96SI1 283 aaPredicted RBP21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 SNRNP25Q9BV90 132 aaKnown RBP21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 TRIM7Q9C029 511 aa21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 SLC39A8Q9C0K1 460 aa21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 SUV39H2Q9H5I1 410 aa21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 HAUS4Q9H6D7 363 aa21.34■■□□□ 1.01
CHRNB1-206ENST00000574054 DFFAO00273 331 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 PRPSAP2O60256 369 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 GCATO75600 419 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 RNF8O76064 485 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 FTLP02792 175 aaPredicted RBP21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 EIF4A3P38919 411 aaKnown RBP21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 ADKP55263 362 aaKnown RBP21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 GRM3Q14832 879 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 LRRC14Q15048 493 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 NR0B2Q15466 257 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 PPP6R3Q5H9R7 873 aaPredicted RBP21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 ERAP2Q6P179 960 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 MACC1Q6ZN28 852 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 RFX8Q6ZV50 586 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 ZNF571Q7Z3V5 609 aaPredicted RBP21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 ARFGAP1Q8N6T3 406 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 PAF1Q8N7H5 531 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 SNIP1Q8TAD8 396 aaKnown RBP21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 ZNF653Q96CK0 615 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 BPIFA3Q9BQP9 254 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 CNOT8Q9UFF9 292 aaKnown RBP21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 SALL4Q9UJQ4 1053 aa21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 PNMA8BQ9ULN7 279 aaPredicted RBP21.33■■□□□ 1.01
CHRNB1-206ENST00000574054 SMG1Q96Q15 3661 aaKnown RBP21.32■■□□□ 1
CHRNB1-206ENST00000574054 TMEM191CA6NGB0 347 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 EIF3CLB5ME19 914 aaKnown RBP21.32■■□□□ 1
CHRNB1-206ENST00000574054 TOR1BO14657 336 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 MUSKO15146 869 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 BUB1BO60566 1050 aaPredicted RBP21.32■■□□□ 1
CHRNB1-206ENST00000574054 USP12O75317 370 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 PALMO75781 387 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 PRKCGP05129 697 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 MPOP05164 745 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 ANXA6P08133 673 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 C6P13671 934 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 MIPP30301 263 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 PPARDQ03181 441 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 KLHL30Q0D2K2 578 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 CCDC173Q0VFZ6 552 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 TCEA2Q15560 299 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 UGP2Q16851 508 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 TBC1D25Q3MII6 688 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 E4F1Q66K89 784 aaPredicted RBP21.32■■□□□ 1
CHRNB1-206ENST00000574054 CAMK1DQ8IU85 385 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 HCAR2Q8TDS4 363 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 GLMNQ92990 594 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 ZNF641Q96N77 438 aaPredicted RBP21.32■■□□□ 1
CHRNB1-206ENST00000574054 EIF3CQ99613 913 aaKnown RBP21.32■■□□□ 1
CHRNB1-206ENST00000574054 LRRC61Q9BV99 259 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 ATP13A3Q9H7F0 1226 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 SP110Q9HB58 689 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 MYO1AQ9UBC5 1043 aa21.32■■□□□ 1
CHRNB1-206ENST00000574054 PTPRQQ9UMZ3 2332 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 TSPAN11A1L157 253 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 TPP1O14773 563 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 LZTS3O60299 673 aaPredicted RBP21.31■■□□□ 1
CHRNB1-206ENST00000574054 ERCC2P18074 760 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 RPIAP49247 311 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 LIG3P49916 1009 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 GABREP78334 506 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 WSCD2Q2TBF2 565 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 CAVIN1Q6NZI2 390 aaKnown RBP21.31■■□□□ 1
CHRNB1-206ENST00000574054 BRAT1Q6PJG6 821 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 CRTC1Q6UUV9 634 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 SRLQ86TD4 932 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 HID1Q8IV36 788 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 TSEN2Q8NCE0 465 aaKnown RBP21.31■■□□□ 1
CHRNB1-206ENST00000574054 TUBGCP5Q96RT8 1024 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 CINPQ9BW66 212 aaPredicted RBP21.31■■□□□ 1
CHRNB1-206ENST00000574054 AIPL1Q9NZN9 384 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 DOLKQ9UPQ8 538 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 ATP8A1Q9Y2Q0 1164 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 SCINQ9Y6U3 715 aa21.31■■□□□ 1
CHRNB1-206ENST00000574054 EIF4E1BA6NMX2 242 aaKnown RBP21.3■■□□□ 1
CHRNB1-206ENST00000574054 LMO7DNF2Z398 122 aa21.3■■□□□ 1
CHRNB1-206ENST00000574054 DDX3XO00571 662 aaKnown RBP eCLIP21.3■■□□□ 12e-8■■■■■ 58.7
CHRNB1-206ENST00000574054 RIOK3O14730 519 aaKnown RBP21.3■■□□□ 1
CHRNB1-206ENST00000574054 KALRNO60229 2985 aa21.3■■□□□ 1
CHRNB1-206ENST00000574054 PCCBP05166 539 aa21.3■■□□□ 1
CHRNB1-206ENST00000574054 SKILP12757 684 aa21.3■■□□□ 1
CHRNB1-206ENST00000574054 TSHRP16473 764 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms