RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 TBC1D30Q9Y2I9 924 aa9.43□□□□□ -0.9
NPLOC4-210ENST00000572824 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 LY6G6EA0A0G2JKS1 128 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 A0A1W2PQU0 124 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 GTPBP10A4D1E9 387 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 PMS2P1A4D2B8 440 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 E9PAM4 449 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 F8VZ95 297 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 TLR4O00206 839 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 KPNA3O00505 521 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 PES1O00541 588 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 SRGAP2O75044 1071 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 ZMPSTE24O75844 475 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 NEBLO76041 1014 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 GFPT2O94808 682 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 PRB1P04280 392 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 ITGAVP06756 1048 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 GLI1P08151 1106 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 CELA3AP09093 270 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 GIMD1P0DJR0 217 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 ITIH2P19823 946 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 CHRNA3P32297 505 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 CDH5P33151 784 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 CD68P34810 354 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 KRT9P35527 623 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 CDH4P55283 916 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 FMO1Q01740 532 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 DEUP1Q05D60 604 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 ZNF177Q13360 481 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 BNIPLQ7Z465 357 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 DRC7Q8IY82 874 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 SLC25A45Q8N413 288 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 CCDC185Q8N715 623 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 ATP11CQ8NB49 1132 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 TMEM145Q8NBT3 493 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 SLC30A5Q8TAD4 765 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 GPT2Q8TD30 523 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 NT5C3BQ969T7 300 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 PCDHB18PQ96TA0 734 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 CDC6Q99741 560 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 C11orf70Q9BRQ4 267 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 TM6SF2Q9BZW4 377 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 KLC2Q9H0B6 622 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 GDF3Q9NR23 364 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 KCNK4Q9NYG8 393 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 TMEM59LQ9UK28 342 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 PNMA8BQ9ULN7 279 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 SCML1Q9UN30 329 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 HS3ST2Q9Y278 367 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 PCDHB1Q9Y5F3 818 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 U3KQA8 63 aa9.42□□□□□ -0.9
NPLOC4-210ENST00000572824 DRGXA6NNA5 263 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 MCF2LO15068 1137 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 SIGLEC6O43699 453 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 EIF4EBP3O60516 100 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 ADAM11O75078 769 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 CLDN11O75508 207 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 LEFTY1O75610 366 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 LDOC1O95751 146 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 UCHL3P15374 230 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 ZNF18P17022 549 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 GABRB2P47870 512 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 E2F5Q15329 346 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 TCEA2Q15560 299 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 TPD52L1Q16890 204 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 ZNF284Q2VY69 593 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 PARS2Q7L3T8 475 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 TMC6Q7Z403 805 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 TRIM69Q86WT6 500 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 PYROXD2Q8N2H3 581 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 ZNF557Q8N988 423 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 FUBP1Q96AE4 644 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 TRIM56Q9BRZ2 755 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 SPON2Q9BUD6 331 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 CALN1Q9BXU9 219 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 NRSN2Q9GZP1 204 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 TCEAL2Q9H3H9 227 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 WDCPQ9H6R7 721 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 NLRC4Q9NPP4 1024 aa9.41□□□□□ -0.9
NPLOC4-210ENST00000572824 IGLV3-10A0A075B6K4 115 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 POM121BA6NF01 834 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 DDX3YO15523 660 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 RFPL3O75679 317 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 FGFR1OPO95684 399 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 THEGLP0DJG4 465 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 SLC2A3P11169 496 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 RDXP35241 583 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 FANCCQ00597 558 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 SEMG2Q02383 582 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 SULT2A1Q06520 285 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 PTP4A2Q12974 167 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 TARDBPQ13148 414 aaKnown RBP eCLIP9.4□□□□□ -0.91e-7■■■■□ 20.6
NPLOC4-210ENST00000572824 SLC12A1Q13621 1099 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 KRT31Q15323 416 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 SLC25A52Q3SY17 297 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 CCDC14Q49A88 953 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 ATXN7L2Q5T6C5 722 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 MANEALQ5VSG8 457 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 KCTD16Q68DU8 428 aa9.4□□□□□ -0.9
NPLOC4-210ENST00000572824 FBXL19Q6PCT2 694 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms