RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 TRIM38O00635 465 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 INSIG1O15503 277 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 LRCH4O75427 683 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 PIGNO95427 931 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 JUPP14923 745 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 ERCC2P18074 760 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 PTMSP20962 102 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 PAPOLAP51003 745 aaKnown RBP12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 SUOXP51687 545 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 UBASH3AP57075 661 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 HNRNPKP61978 463 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■■□□□ 11.9
CTDNEP1-205ENST00000570828 ELP6Q0PNE2 266 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 PDE1CQ14123 709 aaPredicted RBP12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 FZD2Q14332 565 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 CYTH1Q15438 398 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 ZNF542PQ5EBM4 170 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 HES3Q5TGS1 186 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 SLC25A45Q8N413 288 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 TTC13Q8NBP0 860 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 OR4C6Q8NH72 309 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 SYN2Q92777 582 aaPredicted RBP12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 VOPP1Q96AW1 172 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 IQCDQ96DY2 449 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 KLF6Q99612 283 aaPredicted RBP12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 WRAP53Q9BUR4 548 aaKnown RBP12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 CPEB1Q9BZB8 566 aaKnown RBP12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 SLC39A8Q9C0K1 460 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 ZWILCHQ9H900 591 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 SP110Q9HB58 689 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 GPR27Q9NS67 375 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 FAM208BQ5VWN6 2430 aa12.5□□□□□ -0.41
CTDNEP1-205ENST00000570828 TRABD2BA6NFA1 517 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 H3BRJ5 948 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 TAF4O00268 1085 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 MMP20O60882 483 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 PALMO75781 387 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 TM7SF2O76062 418 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 CAPNS1P04632 268 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 NME1P15531 152 aaKnown RBP12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 ACP1P24666 158 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 PCK1P35558 622 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 ARL4AP40617 200 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 THOP1P52888 689 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 CLDN6P56747 220 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 ACAP1Q15027 740 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 ERAP2Q6P179 960 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 BRAT1Q6PJG6 821 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 CYP4V2Q6ZWL3 525 aaPredicted RBP12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 NPWQ8N729 165 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 PAF1Q8N7H5 531 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 ZNF548Q8NEK5 533 aaPredicted RBP12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 NXPE2Q96DL1 559 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 ZNF641Q96N77 438 aaPredicted RBP12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 TUBGCP5Q96RT8 1024 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 DUSP23Q9BVJ7 150 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 CINPQ9BW66 212 aaPredicted RBP12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 ISCUQ9H1K1 167 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 EVA1BQ9NVM1 165 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 NLGN3Q9NZ94 848 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 DKK4Q9UBT3 224 aa12.49□□□□□ -0.41
CTDNEP1-205ENST00000570828 APC2O95996 2303 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 TSPAN11A1L157 253 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 SCAMP1O15126 338 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 CSF2P04141 144 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 SERPING1P05155 500 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 TPM3P06753 285 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 TIMP2P16035 220 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 SERPINA4P29622 427 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 IGFALSP35858 605 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 PBX1P40424 430 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 HCAR3P49019 387 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 PFN3P60673 137 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 ZBED6P86452 979 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 CYP4F3Q08477 520 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 DPYSQ14117 519 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 PTK2BQ14289 1009 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 PIGHQ14442 188 aaPredicted RBP12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 RFTN1Q14699 578 aaPredicted RBP12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 DPYSL2Q16555 572 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 SMTNL2Q2TAL5 461 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 AFMIDQ63HM1 303 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 HGSNATQ68CP4 663 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 ARHGAP12Q8IWW6 846 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 LZTR1Q8N653 840 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 HCAR2Q8TDS4 363 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 CPLX3Q8WVH0 158 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 HSPH1Q92598 858 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 CENPTQ96BT3 561 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 SUV39H2Q9H5I1 410 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 ATP13A3Q9H7F0 1226 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 PCDH12Q9NPG4 1184 aa12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 CWC15Q9P013 229 aaKnown RBP12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 LUC7L2Q9Y383 392 aaKnown RBP12.48□□□□□ -0.41
CTDNEP1-205ENST00000570828 TP53BP1Q12888 1972 aaPredicted RBP12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 K7ESM1 405 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 GPR37O15354 613 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 AQP9O43315 295 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 NEBLO76041 1014 aa12.47□□□□□ -0.41
CTDNEP1-205ENST00000570828 CKMT1AP12532 417 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms