RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 CA9Q16790 459 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 UGP2Q16851 508 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 DEFB133Q30KQ1 61 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 TMEM52BQ4KMG9 183 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 PRRT3Q5FWE3 981 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 BRAT1Q6PJG6 821 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 RD3Q7Z3Z2 195 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 SRLQ86TD4 932 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 PDZD3Q86UT5 571 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 PSTKQ8IV42 348 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 PHACTR4Q8IZ21 702 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 CACTIN-AS1Q8N1I8 211 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 BBS5Q8N3I7 341 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 LZTR1Q8N653 840 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 ATL2Q8NHH9 583 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 IFI44Q8TCB0 444 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 MAPK15Q8TD08 544 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 FNIP1Q8TF40 1166 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 NSMCE1Q8WV22 266 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 SCG3Q8WXD2 468 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 HSPH1Q92598 858 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 CENPTQ96BT3 561 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 NAP1L5Q96NT1 182 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 TUBGCP5Q96RT8 1024 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 KCTD15Q96SI1 283 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 SYT11Q9BT88 431 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 LRRC19Q9H756 370 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 SCUBE2Q9NQ36 999 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 SALL4Q9UJQ4 1053 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 COQ6Q9Y2Z9 468 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 BZW2Q9Y6E2 419 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 IGF2RP11717 2491 aa9.02□□□□□ -0.97
NPLOC4-204ENST00000570324 ADAMTS20P59510 1910 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 SYCE3A1L190 88 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 DDX3XO00571 662 aaKnown RBP eCLIP9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 SPINT1O43278 529 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 GP1BAP07359 652 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 MYF5P13349 255 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 NFKBIAP25963 317 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 IGFALSP35858 605 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 CSNK1DP48730 415 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 HCAR3P49019 387 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 LIG3P49916 1009 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 SCNN1BP51168 640 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 UBASH3AP57075 661 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 FANCCQ00597 558 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 IL10RBQ08334 325 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 EIF2B5Q13144 721 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 C1orf61Q13536 156 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 ZNF235Q14590 738 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 RFTN1Q14699 578 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 RTP5Q14D33 572 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 ACAP1Q15027 740 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 IRF4Q15306 451 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 ELOCQ15369 112 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 NR0B2Q15466 257 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 CDKN3Q16667 212 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 BOLA3Q53S33 107 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 ESRP1Q6NXG1 681 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 TMCO3Q6UWJ1 677 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 ENPP7Q6UWV6 458 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 EFL1Q7Z2Z2 1120 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 CAMK1DQ8IU85 385 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 HID1Q8IV36 788 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 RBFAQ8N0V3 343 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 DCBLD1Q8N8Z6 715 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 FAM181AQ8N9Y4 354 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 TSEN2Q8NCE0 465 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 TPCN2Q8NHX9 752 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 CPLX3Q8WVH0 158 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 RFFLQ8WZ73 363 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 SYNDIG1Q9H7V2 258 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 PDFQ9HBH1 243 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 PCDH12Q9NPG4 1184 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 MBNL1Q9NR56 388 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 GPR27Q9NS67 375 aa9.01□□□□□ -0.97
NPLOC4-204ENST00000570324 MYLKQ15746 1914 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9□□□□□ -0.97
NPLOC4-204ENST00000570324 CACNB4O00305 520 aaPredicted RBP9□□□□□ -0.97
NPLOC4-204ENST00000570324 TPP1O14773 563 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 MUSKO15146 869 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 BRINP1O60477 761 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 USP12O75317 370 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 CSO75390 466 aaKnown RBP9□□□□□ -0.97
NPLOC4-204ENST00000570324 LRCH4O75427 683 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 RASGRP1O95267 797 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 SERPING1P05155 500 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 PCCBP05166 539 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 TPM3P06753 285 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 ALPIP09923 528 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 ELFN1P0C7U0 828 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 GIMD1P0DJR0 217 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 C6P13671 934 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 SERPINB6P35237 376 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 PCK1P35558 622 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 PEX5P50542 639 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 PIGHQ14442 188 aaPredicted RBP9□□□□□ -0.97
NPLOC4-204ENST00000570324 KRT81Q14533 505 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 INPP5AQ14642 412 aa9□□□□□ -0.97
NPLOC4-204ENST00000570324 LBRQ14739 615 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms