RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 ATP13A3Q9H7F0 1226 aa8.3□□□□□ -1.08
BBS4-214ENST00000568535 EURLQ9NYK6 297 aa8.3□□□□□ -1.08
BBS4-214ENST00000568535 HACD3Q9P035 362 aa8.3□□□□□ -1.08
BBS4-214ENST00000568535 CTNNAL1Q9UBT7 734 aa8.3□□□□□ -1.08
BBS4-214ENST00000568535 RIMKLBQ9ULI2 386 aa8.3□□□□□ -1.08
BBS4-214ENST00000568535 HS3ST2Q9Y278 367 aa8.3□□□□□ -1.08
BBS4-214ENST00000568535 FCF1Q9Y324 198 aaKnown RBP8.3□□□□□ -1.08
BBS4-214ENST00000568535 DOCK4Q8N1I0 1966 aa8.3□□□□□ -1.08
BBS4-214ENST00000568535 ZCWPW2A0A1B0GU75 182 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 FAM47DPA6NHR8 397 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 ANKRD66B4E2M5 251 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 PFDN6O15212 129 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 LINC01565O15544 149 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 GALR2O43603 387 aaPredicted RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 SOCS5O75159 536 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 POP4O95707 220 aaKnown RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 CD160O95971 181 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 GSRP00390 522 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 MT-CO1P00395 513 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 C1QAP02745 245 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 CYP17A1P05093 508 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 SRPRAP08240 638 aaKnown RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 ATXN1LP0C7T5 689 aaKnown RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 ERVK-10P10266 1014 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 KRT4P19013 534 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 POU3F3P20264 500 aaPredicted RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 NMBRP28336 390 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 GP5P40197 560 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 CHRNA4P43681 627 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 GRIA4P48058 902 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 POLD2P49005 469 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 NUMBP49757 651 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 GYS2P54840 703 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 CSE1LP55060 971 aaKnown RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 ST8SIA6P61647 398 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 POLR2LP62875 67 aaKnown RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 EFTUD2Q15029 972 aaKnown RBP eCLIP8.29□□□□□ -1.08
BBS4-214ENST00000568535 HSP90AA5PQ58FG0 334 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 CARD16Q5EG05 197 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 TSTD2Q5T7W7 516 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 MBLAC2Q68D91 279 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 KIAA0930Q6ICG6 404 aaPredicted RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 TRMT10BQ6PF06 316 aaKnown RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 CES3Q6UWW8 571 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 EP400NLQ6ZTU2 488 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 MTSS1LQ765P7 747 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 KIAA0907Q7Z7F0 614 aaPredicted RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 CYP4X1Q8N118 509 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 NAT16Q8N8M0 369 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 OR2AP1Q8NGE2 309 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 BLOC1S5Q8TDH9 187 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 STYXQ8WUJ0 223 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 PDCD6IPQ8WUM4 868 aaKnown RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 PTPRN2Q92932 1015 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 ELSPBP1Q96BH3 223 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 CENPTQ96BT3 561 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 MFSD3Q96ES6 412 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 SGSM3Q96HU1 749 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 EXOC2Q96KP1 924 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 FAM161BQ96MY7 647 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 IQCGQ9H095 443 aaKnown RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 PLAC1Q9HBJ0 212 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 INTS9Q9NV88 658 aaKnown RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 CLDND1Q9NY35 253 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.29□□□□□ -1.08
BBS4-214ENST00000568535 DEC1Q9P2X7 70 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 HECAQ9UBI9 543 aaPredicted RBP8.29□□□□□ -1.08
BBS4-214ENST00000568535 LHX3Q9UBR4 397 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 FBXO10Q9UK96 956 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 CLEC4EQ9ULY5 219 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 PLA2G4CQ9UP65 541 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 CHKBQ9Y259 395 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 SLC27A6Q9Y2P4 619 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 ACTL7AQ9Y615 435 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 NUP205Q92621 2012 aa8.29□□□□□ -1.08
BBS4-214ENST00000568535 OBSL1O75147 1896 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 TMEM120BA0PK00 339 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 MROH6A6NGR9 719 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 SRRM3A6NNA2 597 aaPredicted RBP8.28□□□□□ -1.08
BBS4-214ENST00000568535 CXorf49A8MYA2 514 aaPredicted RBP8.28□□□□□ -1.08
BBS4-214ENST00000568535 PRPF4O43172 522 aaKnown RBP eCLIP8.28□□□□□ -1.08
BBS4-214ENST00000568535 SLC7A4O43246 635 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 FAM155BO75949 473 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 ZWINTO95229 277 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 VAPBO95292 243 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 SRCP12931 536 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 LAMP2P13473 410 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 PSMC3P17980 439 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 RGRP47804 291 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 CCT5P48643 541 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 PRAMEP78395 509 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 FCHO2Q0JRZ9 810 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 GALNT3Q14435 633 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 EIF4HQ15056 248 aaKnown RBP8.28□□□□□ -1.08
BBS4-214ENST00000568535 TAF1AQ15573 450 aaPredicted RBP8.28□□□□□ -1.08
BBS4-214ENST00000568535 DLG2Q15700 870 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 CNGA3Q16281 694 aa8.28□□□□□ -1.08
BBS4-214ENST00000568535 CTC1Q2NKJ3 1217 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms