RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 A0A087WZ62 844 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 PPEF2O14830 753 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 MTSS1O43312 755 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 FOXD2O60548 495 aaPredicted RBP15.8■□□□□ 0.12
COMMD4-215ENST00000566843 TPH1P17752 444 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 ADORA2BP29275 332 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 LRPAP1P30533 357 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 BCAP31P51572 246 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 SLC7A2P52569 658 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 PITX1P78337 314 aaPredicted RBP15.8■□□□□ 0.12
COMMD4-215ENST00000566843 CDH17Q12864 832 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 RAB39AQ14964 217 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 AARS2Q5JTZ9 985 aaKnown RBP15.8■□□□□ 0.12
COMMD4-215ENST00000566843 DCAF15Q66K64 600 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 CPNE9Q8IYJ1 553 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 CRYBG2Q8N1P7 616 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 SHCBP1Q8NEM2 672 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 OR6B3Q8NGW1 331 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 SLC35B4Q969S0 331 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 ITPKCQ96DU7 683 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 APOL2Q9BQE5 337 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 FDXACB1Q9BRP7 624 aaPredicted RBP15.8■□□□□ 0.12
COMMD4-215ENST00000566843 GPATCH1Q9BRR8 931 aaKnown RBP15.8■□□□□ 0.12
COMMD4-215ENST00000566843 YTHDF1Q9BYJ9 559 aaKnown RBP15.8■□□□□ 0.12
COMMD4-215ENST00000566843 GNPTGQ9UJJ9 305 aa15.8■□□□□ 0.12
COMMD4-215ENST00000566843 MTF2Q9Y483 593 aaPredicted RBP15.8■□□□□ 0.12
COMMD4-215ENST00000566843 A0A087X1B8 175 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 A0A1W2PPW3 197 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 SNAP91O60641 907 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 CAPN15O75808 1086 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 BAIAP3O94812 1187 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 STMN1P16949 149 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 ERCC2P18074 760 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 NFKB1P19838 968 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 GRIA3P42263 894 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 CCR3P51677 355 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 C1QTNF8P60827 252 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 INTS6LQ5JSJ4 861 aaKnown RBP15.79■□□□□ 0.12
COMMD4-215ENST00000566843 NANOGP8Q6NSW7 305 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 EEPD1Q7L9B9 569 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 SULF1Q8IWU6 871 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 TANKQ92844 425 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 C9orf16Q9BUW7 83 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 DERAQ9Y315 318 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 POLR2AP24928 1970 aaKnown RBP15.79■□□□□ 0.12
COMMD4-215ENST00000566843 FAM95CA0A1B0GW59 222 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 ZBTB11O95625 1053 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-215ENST00000566843 FUCA1P04066 466 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 OCM2P0CE71 109 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 OCMP0CE72 109 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-215ENST00000566843 HNRNPLP14866 589 aaKnown RBP eCLIP15.79■□□□□ 0.12
COMMD4-215ENST00000566843 ARSAP15289 507 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 KPNA2P52292 529 aaKnown RBP15.79■□□□□ 0.12
COMMD4-215ENST00000566843 SEMA3BQ13214 749 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 ZNF460Q14592 562 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 PPP1R3AQ16821 1122 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 TBCELQ5QJ74 424 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 GPR107Q5VW38 600 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 ANKRD26P1Q6NSI1 321 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 CENPSQ8N2Z9 138 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 LINC01465Q8N7H1 131 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 SEPT8Q92599 483 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 FEM1CQ96JP0 617 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 VAT1Q99536 393 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 TUBA1CQ9BQE3 449 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 TRIM15Q9C019 465 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 MUC3BQ9H195 1237 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 SMARCAD1Q9H4L7 1026 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 EML4Q9HC35 981 aaKnown RBP15.79■□□□□ 0.12
COMMD4-215ENST00000566843 TNFRSF12AQ9NP84 129 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 GMPR2Q9P2T1 348 aaKnown RBP15.79■□□□□ 0.12
COMMD4-215ENST00000566843 ABCD2Q9UBJ2 740 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 SFMBT1Q9UHJ3 866 aa15.79■□□□□ 0.12
COMMD4-215ENST00000566843 MAGED2Q9UNF1 606 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-215ENST00000566843 HCRTO43612 131 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 GPC4O75487 556 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 RASAL1O95294 804 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 UGT1A6P19224 532 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 CD247P20963 164 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 UGT1A1P22309 533 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 UGT1A4P22310 534 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 UGT1A3P35503 534 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 UGT1A5P35504 534 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 GRM5P41594 1212 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 HCAR3P49019 387 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 PSMD7P51665 324 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 TKTL1P51854 596 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 ATP6V0D1P61421 351 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 GALNT1Q10472 559 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-215ENST00000566843 FGD3Q5JSP0 725 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 NAPEPLDQ6IQ20 393 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 TMEM26Q6ZUK4 368 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 LRRC52Q8N7C0 313 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 HEXDCQ8WVB3 486 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 HDAC11Q96DB2 347 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 SNX27Q96L92 541 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 TDRD1Q9BXT4 1180 aaKnown RBP15.78■□□□□ 0.12
COMMD4-215ENST00000566843 DHRS12A0PJE2 317 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 DYTNA2CJ06 578 aa15.78■□□□□ 0.12
COMMD4-215ENST00000566843 IQCA1LA6NCM1 817 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms