RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SHROOM3Q8TF72 1996 aa16.92■□□□□ 0.3
CMTM3-213ENST00000566756 CLGNO14967 610 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 ME2P23368 584 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 HSPA13P48723 471 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 THOP1P52888 689 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 FOLH1Q04609 750 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 DYNC1I2Q13409 638 aaKnown RBP16.91■□□□□ 0.3
CMTM3-213ENST00000566756 ADGRE1Q14246 886 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 LRRC36Q1X8D7 754 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 GRAMD1BQ3KR37 738 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 MANEALQ5VSG8 457 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 OTOP3Q7RTS5 596 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 TICAM1Q8IUC6 712 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 DQX1Q8TE96 717 aaKnown RBP16.91■□□□□ 0.3
CMTM3-213ENST00000566756 CDRT15Q96T59 188 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 WDR41Q9HAD4 459 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 CLIC5Q9NZA1 410 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 UBP1Q9NZI7 540 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 COMMD3-BMI1R4GMX3 469 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 SCN5AQ14524 2016 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 NLRC5Q86WI3 1866 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 NEMP1O14524 444 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 MAFKO60675 156 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 BCAS2O75934 225 aaPredicted RBP16.91■□□□□ 0.3
CMTM3-213ENST00000566756 ATP5F1P24539 256 aaPredicted RBP16.91■□□□□ 0.3
CMTM3-213ENST00000566756 ARNTP27540 789 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 CD151P48509 253 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 ILF2Q12905 390 aaKnown RBP16.91■□□□□ 0.3
CMTM3-213ENST00000566756 PSMD5Q16401 504 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 CNPY1Q3B7I2 92 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 RASIP1Q5U651 963 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 C1orf53Q5VUE5 145 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 GALNT7Q86SF2 657 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 ZNF280BQ86YH2 543 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 THEM5Q8N1Q8 247 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 AFAP1L2Q8N4X5 818 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 HIPK4Q8NE63 616 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 CEP70Q8NHQ1 597 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 AGR3Q8TD06 166 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 EDEM1Q92611 657 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 TOP1MTQ969P6 601 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 RCN3Q96D15 328 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 DCUN1D1Q96GG9 259 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 LRGUKQ96M69 825 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 TOX2Q96NM4 488 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 VCX3AQ9NNX9 186 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 TBC1D13Q9NVG8 400 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 PLK2Q9NYY3 685 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 RIMS3Q9UJD0 308 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 PCDHB8Q9UN66 801 aa16.91■□□□□ 0.3
CMTM3-213ENST00000566756 GOLGA8TH3BQL2 631 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 IRAK2O43187 625 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 CXCL10P02778 98 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 GSTT1P30711 240 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 MNX1P50219 401 aaPredicted RBP16.9■□□□□ 0.3
CMTM3-213ENST00000566756 POLE2P56282 527 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 NRG1Q02297 640 aaPredicted RBP16.9■□□□□ 0.3
CMTM3-213ENST00000566756 GALNT1Q10472 559 aaPredicted RBP16.9■□□□□ 0.3
CMTM3-213ENST00000566756 MAPRE2Q15555 327 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 MAPRE1Q15691 268 aaKnown RBP16.9■□□□□ 0.3
CMTM3-213ENST00000566756 PAN2Q504Q3 1202 aaKnown RBP16.9■□□□□ 0.3
CMTM3-213ENST00000566756 PPM1LQ5SGD2 360 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 TSTD2Q5T7W7 516 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 SLC39A5Q6ZMH5 540 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 CHSY3Q70JA7 882 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 MYLPFQ96A32 169 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 CELF6Q96J87 481 aaKnown RBP16.9■□□□□ 0.3
CMTM3-213ENST00000566756 PKMYT1Q99640 499 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 CNOT11Q9UKZ1 510 aaKnown RBP16.9■□□□□ 0.3
CMTM3-213ENST00000566756 PCDHB7Q9Y5E2 793 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 SNX10Q9Y5X0 201 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 BRCA2P51587 3418 aa16.9■□□□□ 0.3
CMTM3-213ENST00000566756 PRSS51A0A1B0GVH4 220 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 VAPBO95292 243 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 ITGB1P05556 798 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 F7P08709 466 aaPredicted RBP16.89■□□□□ 0.3
CMTM3-213ENST00000566756 GLRBP48167 497 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 ART3Q13508 389 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 AFMIDQ63HM1 303 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 OVOS1Q6IE37 1185 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 CEP97Q8IW35 865 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 PELI3Q8N2H9 469 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 EFCAB3Q8N7B9 438 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 SPATA22Q8NHS9 363 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 CALML6Q8TD86 181 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 FATE1Q969F0 183 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 RNF34Q969K3 372 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 NXNL1Q96CM4 212 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 CATSPER2Q96P56 530 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 ARNT2Q9HBZ2 717 aa16.89■□□□□ 0.3
CMTM3-213ENST00000566756 MAGED2Q9UNF1 606 aaPredicted RBP16.89■□□□□ 0.3
CMTM3-213ENST00000566756 COPG1Q9Y678 874 aaKnown RBP16.89■□□□□ 0.3
CMTM3-213ENST00000566756 CEP350Q5VT06 3117 aa16.89■□□□□ 0.29
CMTM3-213ENST00000566756 PATJQ8NI35 1801 aa16.89■□□□□ 0.29
CMTM3-213ENST00000566756 TCAF2A6NFQ2 919 aa16.89■□□□□ 0.29
CMTM3-213ENST00000566756 SDHDO14521 159 aa16.89■□□□□ 0.29
CMTM3-213ENST00000566756 B4GALT3O60512 393 aa16.89■□□□□ 0.29
CMTM3-213ENST00000566756 PQBP1O60828 265 aaKnown RBP16.89■□□□□ 0.29
CMTM3-213ENST00000566756 XRCC1P18887 633 aaPredicted RBP16.89■□□□□ 0.29
CMTM3-213ENST00000566756 MPP1Q00013 466 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms