RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 NUMA1Q14980 2115 aa11.59□□□□□ -0.55
KARS-207ENST00000566560 A0A1W2PP55 124 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 GCATO75600 419 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 RNASEH2AO75792 299 aaKnown RBP11.58□□□□□ -0.56
KARS-207ENST00000566560 ECEL1O95672 775 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 GAS8O95995 478 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 CES1P23141 567 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 HOXA6P31267 233 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 NEK3P51956 506 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 SKOR1P84550 965 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 LMNB2Q03252 620 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 C2orf54Q08AI8 447 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 DMWDQ09019 674 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 TRAF2Q12933 501 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 SLC14A2Q15849 920 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 ZNF805Q5CZA5 627 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 DNTTIP2Q5QJE6 756 aaKnown RBP11.58□□□□□ -0.56
KARS-207ENST00000566560 CAMK1DQ8IU85 385 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 KLHL7Q8IXQ5 586 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 HDDC3Q8N4P3 179 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 AADATQ8N5Z0 425 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 PDCD6IPQ8WUM4 868 aaKnown RBP11.58□□□□□ -0.56
KARS-207ENST00000566560 VOPP1Q96AW1 172 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 SPACA7Q96KW9 195 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 NSMCE3Q96MG7 304 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 ZNF641Q96N77 438 aaPredicted RBP11.58□□□□□ -0.56
KARS-207ENST00000566560 FCRL5Q96RD9 977 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 RBM15Q96T37 977 aaKnown RBP eCLIP11.58□□□□□ -0.566e-7■■■■■ 36.2
KARS-207ENST00000566560 OMDQ99983 421 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 TDRD1Q9BXT4 1180 aaKnown RBP11.58□□□□□ -0.56
KARS-207ENST00000566560 PCDH9Q9HC56 1237 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 FBXL12Q9NXK8 326 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 USP36Q9P275 1121 aaKnown RBP11.58□□□□□ -0.56
KARS-207ENST00000566560 SERGEFQ9UGK8 458 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 EBF1Q9UH73 591 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 CYP8B1Q9UNU6 501 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 DRG1Q9Y295 367 aaKnown RBP11.58□□□□□ -0.56
KARS-207ENST00000566560 RAI2Q9Y5P3 530 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 CACNA1HO95180 2353 aa11.58□□□□□ -0.56
KARS-207ENST00000566560 CCDC163A0A0D9SF12 145 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 TSPAN11A1L157 253 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 GOLGA6CA6NDK9 693 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 GOLGA6BA6NDN3 693 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 C16orf96A6NNT2 1141 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 PLK4O00444 970 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 TRAFD1O14545 582 aaPredicted RBP11.57□□□□□ -0.56
KARS-207ENST00000566560 ZNF217O75362 1048 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 MT-CYBP00156 380 aaPredicted RBP11.57□□□□□ -0.56
KARS-207ENST00000566560 CPP00450 1065 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 MMP2P08253 660 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 GOLGA6DP0CG33 693 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 ETS1P14921 441 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 DRD3P35462 400 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 FNTBP49356 437 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 TPMTP51580 245 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 CNTN1Q12860 1018 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 SFSWAPQ12872 951 aaKnown RBP11.57□□□□□ -0.56
KARS-207ENST00000566560 TUBB2AQ13885 445 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 PRPSAP1Q14558 356 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 PCSK7Q16549 785 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 ARMC12Q5T9G4 340 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 FAXCQ5TGI0 409 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 BRAT1Q6PJG6 821 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 USP30Q70CQ3 517 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 ERN2Q76MJ5 926 aaKnown RBP11.57□□□□□ -0.56
KARS-207ENST00000566560 ZNF572Q7Z3I7 529 aaPredicted RBP11.57□□□□□ -0.56
KARS-207ENST00000566560 PRUNE1Q86TP1 453 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 PRPF39Q86UA1 669 aaKnown RBP11.57□□□□□ -0.56
KARS-207ENST00000566560 FAM124AQ86V42 546 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 KBTBD6Q86V97 674 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 LONP2Q86WA8 852 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 TAB3Q8N5C8 712 aaPredicted RBP11.57□□□□□ -0.56
KARS-207ENST00000566560 GLIS1Q8NBF1 620 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 SPATA4Q8NEY3 305 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 IPMKQ8NFU5 416 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 ATL2Q8NHH9 583 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 SPATA22Q8NHS9 363 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 ECHDC3Q96DC8 303 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 OXNAD1Q96HP4 312 aaPredicted RBP11.57□□□□□ -0.56
KARS-207ENST00000566560 RUNDC3BQ96NL0 473 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 PPP1R2P1Q96PQ5 205 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 TUBB2BQ9BVA1 445 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 FSD1LQ9BXM9 530 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 SUV39H2Q9H5I1 410 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 VPS45Q9NRW7 570 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 GOLGA6AQ9NYA3 693 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 UBP1Q9NZI7 540 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 PAK5Q9P286 719 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 DKK3Q9UBP4 350 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 FAM153AQ9UHL3 310 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 FZD4Q9ULV1 537 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 NCKAP1Q9Y2A7 1128 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 PCDHGC4Q9Y5F7 938 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 SPAG17Q6Q759 2223 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 FANCMQ8IYD8 2048 aa11.57□□□□□ -0.56
KARS-207ENST00000566560 UPK3BL1B0FP48 263 aa11.56□□□□□ -0.56
KARS-207ENST00000566560 UPK3BL2E5RIL1 263 aa11.56□□□□□ -0.56
KARS-207ENST00000566560 SLC7A4O43246 635 aa11.56□□□□□ -0.56
KARS-207ENST00000566560 HTRA2O43464 458 aaPredicted RBP11.56□□□□□ -0.56
KARS-207ENST00000566560 PMPCBO75439 489 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms