RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 LEFTY2O00292 366 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 TRIM24O15164 1050 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 CLDN11O75508 207 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 RFPL1O75677 317 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 ANXA9O76027 345 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 VAPBO95292 243 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 PRAMEF12O95522 483 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 MT-ND3P03897 115 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 POLBP06746 335 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 RHOP08100 348 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 RHOCP08134 193 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 PDHA1P08559 390 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 PGAM1P18669 254 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 CA4P22748 312 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 SP100P23497 879 aaPredicted RBP6.29□□□□□ -1.4
CHD9-217ENST00000565832 ADRA1DP25100 572 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 STX2P32856 288 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 MAPK8P45983 427 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 PPP3CCP48454 512 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 CCT5P48643 541 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 MAPKAPK2P49137 400 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 YBEYP58557 167 aaPredicted RBP6.29□□□□□ -1.4
CHD9-217ENST00000565832 ARF5P84085 180 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 IL10RBQ08334 325 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 DMTNQ08495 405 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 CDH17Q12864 832 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 CTBP1Q13363 440 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 MSLNQ13421 630 aaPredicted RBP6.29□□□□□ -1.4
CHD9-217ENST00000565832 GALNT3Q14435 633 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 CYTH1Q15438 398 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 ZSCAN26Q16670 478 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 ANO4Q32M45 955 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 PPM1JQ5JR12 505 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 RABGAP1LQ5R372 815 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 GPR158Q5T848 1215 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 NAPEPLDQ6IQ20 393 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 KDELC1Q6UW63 502 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 TMC5Q6UXY8 1006 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 Q6ZNB5 142 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 CCDC149Q6ZUS6 474 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 TMEM25Q86YD3 366 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 LRRC49Q8IUZ0 686 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 LRRC34Q8IZ02 419 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 CMTM8Q8IZV2 173 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 OR6K2Q8NGY2 324 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 TCP10LQ8TDR4 215 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 PKNOX2Q96KN3 472 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 DMRTB1Q96MA1 342 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 LRRC3BQ96PB8 259 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 ZNF317Q96PQ6 595 aaPredicted RBP6.29□□□□□ -1.4
CHD9-217ENST00000565832 SMC6Q96SB8 1091 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 FEM1AQ9BSK4 669 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 SLC25A51Q9H1U9 297 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 CNOT10Q9H9A5 744 aaKnown RBP6.29□□□□□ -1.4
CHD9-217ENST00000565832 ASAH2Q9NR71 780 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 IARS2Q9NSE4 1012 aaKnown RBP6.29□□□□□ -1.4
CHD9-217ENST00000565832 SSX2IPQ9Y2D8 614 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 TBC1D30Q9Y2I9 924 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 PCDHGC4Q9Y5F7 938 aa6.29□□□□□ -1.4
CHD9-217ENST00000565832 A0A1B0GVM2 712 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 TCAF2A6NFQ2 919 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 FAM47DPA6NHR8 397 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 ERI2A8K979 691 aaKnown RBP6.28□□□□□ -1.4
CHD9-217ENST00000565832 TCP11X1B4DZS4 312 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 NDUFAB1O14561 156 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 AURKAO14965 403 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 SMAD6O43541 496 aaKnown RBP6.28□□□□□ -1.4
CHD9-217ENST00000565832 KDELR3O43731 214 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 TSHRP16473 764 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 ARNTP27540 789 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 ATP5DP30049 168 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 GKP32189 559 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 NPY2RP49146 381 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 OXCT1P55809 520 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 GPM6BQ13491 265 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 SEPT6Q14141 434 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 DLG2Q15700 870 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 SIRPB2Q5JXA9 342 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 TEDDM1Q5T9Z0 273 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 LDB1Q86U70 411 aaPredicted RBP6.28□□□□□ -1.4
CHD9-217ENST00000565832 DENND6AQ8IWF6 608 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 ELMOD1Q8N336 334 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 BANPQ8N9N5 519 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 TDRD5Q8NAT2 981 aaKnown RBP6.28□□□□□ -1.4
CHD9-217ENST00000565832 ITFG1Q8TB96 612 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 SH3RF2Q8TEC5 729 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 DYDC1Q8WWB3 177 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 USP13Q92995 863 aaPredicted RBP6.28□□□□□ -1.4
CHD9-217ENST00000565832 TTC17Q96AE7 1141 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 THOC1Q96FV9 657 aaKnown RBP6.28□□□□□ -1.4
CHD9-217ENST00000565832 CERS2Q96G23 380 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 RPL10LQ96L21 214 aaKnown RBP6.28□□□□□ -1.4
CHD9-217ENST00000565832 MAGEH1Q9H213 219 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 SUDS3Q9H7L9 328 aaPredicted RBP6.28□□□□□ -1.4
CHD9-217ENST00000565832 CAB39LQ9H9S4 337 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 C20orf96Q9NUD7 363 aaPredicted RBP6.28□□□□□ -1.4
CHD9-217ENST00000565832 ZDHHC3Q9NYG2 299 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 STOML2Q9UJZ1 356 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 LZTS1Q9Y250 596 aa6.28□□□□□ -1.4
CHD9-217ENST00000565832 CHKBQ9Y259 395 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms