RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 TMCO4Q5TGY1 634 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 VSTM4Q8IW00 320 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 OR8K1Q8NGG5 319 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 FAM174AQ8TBP5 190 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 ASB12Q8WXK4 309 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 TSC1Q92574 1164 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 TUBGCP5Q96RT8 1024 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 DEF6Q9H4E7 631 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 ATP13A3Q9H7F0 1226 aa25.52■■□□□ 1.68
AC009041.3-201ENST00000564390 SPTY2D1-AS1A0A0U1RR47 76 aa25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 TTC24A2A3L6 582 aaPredicted RBP25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 SIGLEC6O43699 453 aa25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 RFPL3O75679 317 aa25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 SERPINA4P29622 427 aa25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 PFN3P60673 137 aa25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 ELP6Q0PNE2 266 aa25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 RFTN1Q14699 578 aaPredicted RBP25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 LBRQ14739 615 aaKnown RBP25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 UGP2Q16851 508 aa25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 PARGQ86W56 976 aa25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 DCP2Q8IU60 420 aaKnown RBP25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 CTNNBL1Q8WYA6 563 aaPredicted RBP25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 CENPTQ96BT3 561 aa25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 NSMCE3Q96MG7 304 aa25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 ZNF641Q96N77 438 aaPredicted RBP25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 MBNL1Q9NR56 388 aaKnown RBP25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 SEPT3Q9UH03 358 aa25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 LRRK1Q38SD2 2015 aa25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 CACNA1BQ00975 2339 aa25.51■■□□□ 1.67
AC009041.3-201ENST00000564390 TDRD6O60522 2096 aaKnown RBP25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 MMP12P39900 470 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 CSNK1DP48730 415 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 SCNN1BP51168 640 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 ZNF235Q14590 738 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 IRF4Q15306 451 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 ASTE1Q2TB18 679 aaPredicted RBP25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 PROX2Q3B8N5 592 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 TMEM52BQ4KMG9 183 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 ATP13A4Q4VNC1 1196 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 BRAT1Q6PJG6 821 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 GALNT15Q8N3T1 639 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 ATPAF2Q8N5M1 289 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 PAF1Q8N7H5 531 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 TP53I13Q8NBR0 393 aaPredicted RBP25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 ABHD10Q9NUJ1 306 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 KLF15Q9UIH9 416 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 ATP8A1Q9Y2Q0 1164 aa25.5■■□□□ 1.67
AC009041.3-201ENST00000564390 TMEM110-MUSTN1A8MSY1 372 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 MFAP3LO75121 409 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 NEBLO76041 1014 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 PROSCO94903 275 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 PEX11BO96011 259 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 C6P13671 934 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 SUOXP51687 545 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 ADKP55263 362 aaKnown RBP25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 BCL2L1Q07817 233 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 SMAD1Q15797 465 aaKnown RBP25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 HADHQ16836 314 aaKnown RBP25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 ERAP2Q6P179 960 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 OR4C6Q8NH72 309 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 HCAR2Q8TDS4 363 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 IFT43Q96FT9 208 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 PSKH2Q96QS6 385 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 CHP1Q99653 195 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 C1QTNF7Q9BXJ2 289 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 SPTLC3Q9NUV7 552 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 ZNHIT6Q9NWK9 470 aaKnown RBP25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 UVRAGQ9P2Y5 699 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 PCDHGA1Q9Y5H4 931 aa25.49■■□□□ 1.67
AC009041.3-201ENST00000564390 RIOK3O14730 519 aaKnown RBP25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 MFSD11O43934 449 aa25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 AKR1B10O60218 316 aa25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 MAFKO60675 156 aa25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 TPM1P09493 284 aa25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 H2AFZP0C0S5 128 aa25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 GIMD1P0DJR0 217 aa25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 NME1P15531 152 aaKnown RBP25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 CKMT2P17540 419 aa25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 SERPINB6P35237 376 aa25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 TAS2R40P59535 323 aa25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 ZNF211Q13398 564 aaPredicted RBP25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 H2AFVQ71UI9 128 aa25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 PGBD5Q8N414 524 aa25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 ZNF548Q8NEK5 533 aaPredicted RBP25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 ZNF599Q96NL3 588 aa25.48■■□□□ 1.67
AC009041.3-201ENST00000564390 SSU72P8A0A1W2PR75 194 aa25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 CSF2P04141 144 aa25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 MYF5P13349 255 aa25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 IL4RP24394 825 aa25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 LIG3P49916 1009 aa25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 ARSEP51690 589 aa25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 THOP1P52888 689 aa25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 AP1S1P61966 158 aa25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 HNRNPKP61978 463 aaKnown RBP eCLIP25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 EIF2B5Q13144 721 aaKnown RBP25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 DPYSL3Q14195 570 aa25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 RBFAQ8N0V3 343 aa25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 ECHDC3Q96DC8 303 aa25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 RCOR3Q9P2K3 495 aaPredicted RBP25.47■■□□□ 1.67
AC009041.3-201ENST00000564390 SHROOM3Q8TF72 1996 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms